RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CYBBP04839 570 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 CAPN1P07384 714 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 NELFEP18615 380 aaKnown RBP15.56■□□□□ 0.08
LRFN1-201ENST00000248668 ATP6V1B2P21281 511 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 CDKL1Q00532 357 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 SGO1Q5FBB7 561 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 Q6ZNB5 142 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 ADGRG2Q8IZP9 1017 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 METTL6Q8TCB7 284 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 SUCOQ9UBS9 1254 aaKnown RBP15.56■□□□□ 0.08
LRFN1-201ENST00000248668 FAM8A1Q9UBU6 413 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 AP4B1Q9Y6B7 739 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 CCDC160A6NGH7 325 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 ZBBXA8MT70 800 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 GAPDHSO14556 408 aaPredicted RBP15.55■□□□□ 0.08
LRFN1-201ENST00000248668 PGM3O95394 542 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 CHEK2O96017 543 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 LRG1P02750 347 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 BPIP17213 487 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 MTX3Q5HYI7 312 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 SAMD4BQ5PRF9 694 aaKnown RBP15.55■□□□□ 0.08
LRFN1-201ENST00000248668 IL27RAQ6UWB1 636 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 SPPL2CQ8IUH8 684 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.55■□□□□ 0.08
LRFN1-201ENST00000248668 ZDHHC7Q9NXF8 308 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 HACD3Q9P035 362 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 TMEM181Q9P2C4 612 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 SYNCRIPO60506 623 aaKnown RBP15.55■□□□□ 0.08
LRFN1-201ENST00000248668 PSMC3P17980 439 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 MNX1P50219 401 aaPredicted RBP15.55■□□□□ 0.08
LRFN1-201ENST00000248668 DHFR2Q86XF0 187 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 CANT1Q8WVQ1 401 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 CEP295NLQ96MC4 621 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 TMEM74Q96NL1 305 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 HERC2P3Q9BVR0 1158 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 P2RY12Q9H244 342 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 LATS2Q9NRM7 1088 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 TBX21Q9UL17 535 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 USP22Q9UPT9 525 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 SLC4A7Q9Y6M7 1214 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 C15orf38-AP3S2A0A0A6YYH1 394 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 FAM149AA5PLN7 773 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 KRT87PA6NCN2 255 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 NPIPB15A6NHN6 443 aaPredicted RBP15.55■□□□□ 0.08
LRFN1-201ENST00000248668 TRBC1P01850 177 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 ACADVLP49748 655 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 NFATC2Q13469 925 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 PHKG1Q16816 387 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 PAGE3Q5JUK9 113 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 IYDQ6PHW0 289 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 DET1Q7L5Y6 550 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 ARPINQ7Z6K5 226 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 SLCO4A1Q96BD0 722 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 CIB1Q99828 191 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 MAGEE1Q9HCI5 957 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 UBAP1Q9NZ09 502 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 CD300AQ9UGN4 299 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 CD84Q9UIB8 345 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 STOML2Q9UJZ1 356 aa15.55■□□□□ 0.08
LRFN1-201ENST00000248668 PEX1O43933 1283 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 MTHFD1P11586 935 aaKnown RBP15.54■□□□□ 0.08
LRFN1-201ENST00000248668 NCK1P16333 377 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 ZNF7P17097 686 aaPredicted RBP15.54■□□□□ 0.08
LRFN1-201ENST00000248668 NFYCQ13952 458 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 PLEKHG6Q3KR16 790 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 ITIH5Q86UX2 942 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 SLC15A3Q8IY34 581 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 TMEM102Q8N9M5 508 aaPredicted RBP15.54■□□□□ 0.08
LRFN1-201ENST00000248668 PIP4K2CQ8TBX8 421 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 MIPOL1Q8TD10 442 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 SKA2Q8WVK7 121 aaPredicted RBP15.54■□□□□ 0.08
LRFN1-201ENST00000248668 DLG3Q92796 817 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 ZNF689Q96CS4 500 aaPredicted RBP15.54■□□□□ 0.08
LRFN1-201ENST00000248668 SDR39U1Q9NRG7 319 aaPredicted RBP15.54■□□□□ 0.08
LRFN1-201ENST00000248668 CMTM6Q9NX76 183 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 PDP2Q9P2J9 529 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 DHRS7Q9Y394 339 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 FXYD1O00168 92 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 AKAP10O43572 662 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 C8AP07357 584 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 UROSP10746 265 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 CKMT2P17540 419 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 WDR5P61964 334 aaKnown RBP15.54■□□□□ 0.08
LRFN1-201ENST00000248668 AP1S1P61966 158 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 LIN52Q52LA3 116 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 SBSNQ6UWP8 590 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 GOLGA7Q7Z5G4 137 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 DDX53Q86TM3 631 aaKnown RBP15.54■□□□□ 0.08
LRFN1-201ENST00000248668 RETREG1Q9H6L5 497 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 ZDHHC6Q9H6R6 413 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 GPR45Q9Y5Y3 372 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 MYO9BQ13459 2157 aa15.54■□□□□ 0.08
LRFN1-201ENST00000248668 GLYATL1P3A0A0U1RQE8 302 aa15.53■□□□□ 0.08
LRFN1-201ENST00000248668 STX16O14662 325 aa15.53■□□□□ 0.08
LRFN1-201ENST00000248668 FGF18O76093 207 aa15.53■□□□□ 0.08
LRFN1-201ENST00000248668 MLYCDO95822 493 aa15.53■□□□□ 0.08
LRFN1-201ENST00000248668 MT-ND1P03886 318 aa15.53■□□□□ 0.08
LRFN1-201ENST00000248668 IDO1P14902 403 aa15.53■□□□□ 0.08
LRFN1-201ENST00000248668 ITGALP20701 1170 aa15.53■□□□□ 0.08
LRFN1-201ENST00000248668 CLCN4P51793 760 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms