RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 PEX13Q92968 403 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 TMEM125Q96AQ2 219 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 SPATA17Q96L03 361 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 MRGPRX2Q96LB1 330 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 TKTL2Q9H0I9 626 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 RIC8BQ9NVN3 520 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 SLC2A6Q9UGQ3 507 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 DNAJC15Q9Y5T4 150 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 SLC38A8A6NNN8 435 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 TNFRSF10BO14763 440 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 NOL3O60936 208 aaKnown RBP20.34■□□□□ 0.85
SNX3-201ENST00000230085 NCAM1P13591 858 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 BCAP31P51572 246 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 NRG1Q02297 640 aaPredicted RBP20.34■□□□□ 0.85
SNX3-201ENST00000230085 VEPH1Q14D04 833 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 BRMS1LQ5PSV4 323 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 ARTNQ5T4W7 220 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 KDELC1Q6UW63 502 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 KCTD8Q6ZWB6 473 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 SPATA19Q7Z5L4 167 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 SPPL2CQ8IUH8 684 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 HS6ST3Q8IZP7 471 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 ELMOD1Q8N336 334 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 SPATA6LQ8N4H0 392 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 IPMKQ8NFU5 416 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 SCAMP5Q8TAC9 235 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 SNRNP27Q8WVK2 155 aaKnown RBP20.34■□□□□ 0.85
SNX3-201ENST00000230085 C3orf30Q96M34 536 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 CORO1BQ9BR76 489 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 CD207Q9UJ71 328 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 VCANP13611 3396 aa20.33■□□□□ 0.85
SNX3-201ENST00000230085 NOTCH4Q99466 2003 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 A0A1W2PP18 115 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 A0A1W2PPW3 197 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 UBXN8O00124 270 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 MT-CYBP00156 380 aaPredicted RBP20.33■□□□□ 0.84
SNX3-201ENST00000230085 HMGA1P17096 107 aaKnown RBP20.33■□□□□ 0.84
SNX3-201ENST00000230085 LBPP18428 481 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 UGT1A6P19224 532 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 CCNA2P20248 432 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 UGT1A1P22309 533 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 UGT1A4P22310 534 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 HTR1EP28566 365 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 UGT1A3P35503 534 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 UGT1A5P35504 534 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 PSMD7P51665 324 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 NTHL1P78549 312 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 TFF2Q03403 129 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 RCAN2Q14206 197 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 CES5AQ6NT32 575 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 CILP2Q8IUL8 1156 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 DDIASQ8IXT1 998 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 BPIFB1Q8TDL5 484 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 ZNF419Q96HQ0 510 aaPredicted RBP20.33■□□□□ 0.84
SNX3-201ENST00000230085 BCL7BQ9BQE9 202 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 MFSD1Q9H3U5 465 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 CYP4F12Q9HCS2 524 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 ANAPC2Q9UJX6 822 aa20.33■□□□□ 0.84
SNX3-201ENST00000230085 EI24O14681 340 aa20.32■□□□□ 0.84
SNX3-201ENST00000230085 EEDO75530 441 aaKnown RBP20.32■□□□□ 0.84
SNX3-201ENST00000230085 HPRP00739 348 aa20.32■□□□□ 0.84
SNX3-201ENST00000230085 PTPN2P17706 415 aa20.32■□□□□ 0.84
SNX3-201ENST00000230085 BMXP51813 675 aa20.32■□□□□ 0.84
SNX3-201ENST00000230085 TAF12Q16514 161 aa20.32■□□□□ 0.84
SNX3-201ENST00000230085 ANKDD1AQ495B1 522 aa20.32■□□□□ 0.84
SNX3-201ENST00000230085 FGD3Q5JSP0 725 aa20.32■□□□□ 0.84
SNX3-201ENST00000230085 GPR107Q5VW38 600 aa20.32■□□□□ 0.84
SNX3-201ENST00000230085 NANOGP8Q6NSW7 305 aa20.32■□□□□ 0.84
SNX3-201ENST00000230085 LAYNQ6UX15 382 aa20.32■□□□□ 0.84
SNX3-201ENST00000230085 ITIH5Q86UX2 942 aa20.32■□□□□ 0.84
SNX3-201ENST00000230085 PROSER1Q86XN7 944 aa20.32■□□□□ 0.84
SNX3-201ENST00000230085 SFRP1Q8N474 314 aa20.32■□□□□ 0.84
SNX3-201ENST00000230085 SLC39A3Q9BRY0 314 aa20.32■□□□□ 0.84
SNX3-201ENST00000230085 DCUN1D5Q9BTE7 237 aa20.32■□□□□ 0.84
SNX3-201ENST00000230085 SLC25A51Q9H1U9 297 aa20.32■□□□□ 0.84
SNX3-201ENST00000230085 ZNF334Q9HCZ1 680 aaPredicted RBP20.32■□□□□ 0.84
SNX3-201ENST00000230085 POLR3BQ9NW08 1133 aaPredicted RBP20.32■□□□□ 0.84
SNX3-201ENST00000230085 AURKCQ9UQB9 309 aa20.32■□□□□ 0.84
SNX3-201ENST00000230085 ERGIC3Q9Y282 383 aa20.32■□□□□ 0.84
SNX3-201ENST00000230085 OAS3Q9Y6K5 1087 aaKnown RBP20.32■□□□□ 0.84
SNX3-201ENST00000230085 ZFC3H1O60293 1989 aaKnown RBP20.32■□□□□ 0.84
SNX3-201ENST00000230085 MROH6A6NGR9 719 aa20.31■□□□□ 0.84
SNX3-201ENST00000230085 WASH4PA8MWX3 477 aa20.31■□□□□ 0.84
SNX3-201ENST00000230085 NR5A2O00482 541 aa20.31■□□□□ 0.84
SNX3-201ENST00000230085 AZIN1O14977 448 aa20.31■□□□□ 0.84
SNX3-201ENST00000230085 CDK14O94921 469 aa20.31■□□□□ 0.84
SNX3-201ENST00000230085 LDLRP01130 860 aa20.31■□□□□ 0.84
SNX3-201ENST00000230085 RHOP08100 348 aa20.31■□□□□ 0.84
SNX3-201ENST00000230085 OCM2P0CE71 109 aa20.31■□□□□ 0.84
SNX3-201ENST00000230085 OCMP0CE72 109 aaPredicted RBP20.31■□□□□ 0.84
SNX3-201ENST00000230085 OXTRP30559 389 aa20.31■□□□□ 0.84
SNX3-201ENST00000230085 GSTM4Q03013 218 aa20.31■□□□□ 0.84
SNX3-201ENST00000230085 ACVR1Q04771 509 aa20.31■□□□□ 0.84
SNX3-201ENST00000230085 RBM48Q5RL73 367 aaKnown RBP20.31■□□□□ 0.84
SNX3-201ENST00000230085 TMEM26Q6ZUK4 368 aa20.31■□□□□ 0.84
SNX3-201ENST00000230085 CENPSQ8N2Z9 138 aa20.31■□□□□ 0.84
SNX3-201ENST00000230085 FAM110BQ8TC76 370 aa20.31■□□□□ 0.84
SNX3-201ENST00000230085 CEP295NLQ96MC4 621 aa20.31■□□□□ 0.84
SNX3-201ENST00000230085 LRRC3Q9BY71 257 aa20.31■□□□□ 0.84
SNX3-201ENST00000230085 CATSPERBQ9H7T0 1116 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms