RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 PRMT5O14744 637 aaPredicted RBP11.93□□□□□ -0.5
CHPF2-201ENST00000035307 LMAN2Q12907 356 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 SLC5A9Q2M3M2 681 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 RAET1GQ6H3X3 334 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 ZFP1Q6P2D0 407 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 SYT12Q8IV01 421 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 ZNF276Q8N554 614 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 BPIFB6Q8NFQ5 453 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 TSPAN14Q8NG11 270 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 PAIP1Q9H074 479 aaKnown RBP11.93□□□□□ -0.5
CHPF2-201ENST00000035307 SYNDIG1Q9H7V2 258 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 EIF2B3Q9NR50 452 aaKnown RBP11.93□□□□□ -0.5
CHPF2-201ENST00000035307 CLEC4EQ9ULY5 219 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 COQ6Q9Y2Z9 468 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 USP3Q9Y6I4 520 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 NUP214P35658 2090 aaPredicted RBP11.93□□□□□ -0.5
CHPF2-201ENST00000035307 PDZK1P1A8MUH7 402 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 OR1I1O60431 355 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 WDR47O94967 919 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 DGKGP49619 791 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 AGTR2P50052 363 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 DGKQP52824 942 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 CDH15P55291 814 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 FAM98BQ52LJ0 330 aaKnown RBP11.93□□□□□ -0.5
CHPF2-201ENST00000035307 RRM2BQ7LG56 351 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 IPPKQ9H8X2 491 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 THG1LQ9NWX6 298 aaKnown RBP11.93□□□□□ -0.5
CHPF2-201ENST00000035307 MOCS1Q9NZB8 636 aa11.93□□□□□ -0.5
CHPF2-201ENST00000035307 SEC16AO15027 2179 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 SLC31A1O15431 190 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 SLC22A3O75751 556 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 WFS1O76024 890 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 PABPC1P11940 636 aaKnown RBP11.92□□□□□ -0.5
CHPF2-201ENST00000035307 NDST2P52849 883 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 ACSM2AQ08AH3 577 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 RAB41Q5JT25 222 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 ACSM2BQ68CK6 577 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 ADCK1Q86TW2 530 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 ARHGAP12Q8IWW6 846 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 WFDC5Q8TCV5 224 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 CDKN2AIPNLQ96HQ2 116 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 TOX2Q96NM4 488 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 FEM1AQ9BSK4 669 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 FAM124BQ9H5Z6 455 aaPredicted RBP11.92□□□□□ -0.5
CHPF2-201ENST00000035307 POLR1BQ9H9Y6 1135 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 TP73O15350 636 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 DEAF1O75398 565 aaPredicted RBP11.92□□□□□ -0.5
CHPF2-201ENST00000035307 CTSAP10619 480 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 GPC1P35052 558 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 SPIDRQ14159 915 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 SETMARQ53H47 684 aaPredicted RBP11.92□□□□□ -0.5
CHPF2-201ENST00000035307 SFT2D3Q587I9 215 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 SDE2Q6IQ49 451 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 GALNT5Q7Z7M9 940 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 VPS37AQ8NEZ2 397 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 GLMNQ92990 594 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 MRGPRX2Q96LB1 330 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 TMEM74Q96NL1 305 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 PNPLA8Q9NP80 782 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 CORO1CQ9ULV4 474 aaPredicted RBP11.92□□□□□ -0.5
CHPF2-201ENST00000035307 RLFQ13129 1914 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 PSME4Q14997 1843 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 PAX3P23760 479 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 ETV4P43268 484 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 YAP1P46937 504 aaKnown RBP11.92□□□□□ -0.5
CHPF2-201ENST00000035307 RAB33AQ14088 237 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 NUDT18Q6ZVK8 323 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 ZDHHC13Q8IUH4 622 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 RDH11Q8TC12 318 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 MCOLN3Q8TDD5 553 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 RNF31Q96EP0 1072 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 GPR22Q99680 433 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 EBPLQ9BY08 206 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 CWH43Q9H720 699 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 COQ10BQ9H8M1 238 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 COMMD8Q9NX08 183 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 IMPAD1Q9NX62 359 aa11.92□□□□□ -0.5
CHPF2-201ENST00000035307 RGPD3A6NKT7 1758 aaPredicted RBP11.91□□□□□ -0.5
CHPF2-201ENST00000035307 RGPD4Q7Z3J3 1758 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 MUSKO15146 869 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 FFAR2O15552 330 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 RNASEH2AO75792 299 aaKnown RBP11.91□□□□□ -0.5
CHPF2-201ENST00000035307 ADSLP30566 484 aaPredicted RBP11.91□□□□□ -0.5
CHPF2-201ENST00000035307 CHI3L1P36222 383 aaPredicted RBP11.91□□□□□ -0.5
CHPF2-201ENST00000035307 IDH2P48735 452 aaKnown RBP11.91□□□□□ -0.5
CHPF2-201ENST00000035307 GPR107Q5VW38 600 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 KIAA0930Q6ICG6 404 aaPredicted RBP11.91□□□□□ -0.5
CHPF2-201ENST00000035307 MSANTD2Q6P1R3 559 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 DPY19L3Q6ZPD9 716 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 PLD3Q8IV08 490 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 KBTBD2Q8IY47 623 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 CANT1Q8WVQ1 401 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 BDH2Q9BUT1 245 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 AKTIPQ9H8T0 292 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 SAGE1Q9NXZ1 904 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 TRPC4Q9UBN4 977 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 LNPEPQ9UIQ6 1025 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 OTOFQ9HC10 1997 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 PTPRFP10586 1907 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 A0A0C4DFX4 3053 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms