RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Gps2Q921N8 327 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 St5Q924W7 1134 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Tpra1Q99MU1 369 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Cox16Q9CR63 106 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Pramef12Q9D2F1 463 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Lztfl1Q9JHQ5 299 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Eif2ak1Q9Z2R9 619 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 MipepA6H611 711 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Skint8A7XV07 398 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Cfap221A9Q751 836 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Mroh8E9PYI4 1049 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Thap8E9Q695 213 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 EmdO08579 259 aaKnown RBP8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Rgs7O54829 469 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Fkbp7O54998 218 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Tnfrsf17O88472 185 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Phkg1P07934 388 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Zfp13P10754 512 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ptbp1P17225 527 aaKnown RBP8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Cass4Q08EC4 804 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Grm2Q14BI2 872 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Cul4aQ3TCH7 759 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Kctd8Q50H33 476 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Hspb6Q5EBG6 162 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Irf4Q64287 450 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Fastkd1Q6DI86 829 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Naa35Q6PHQ8 725 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Olfr94Q6UAH0 386 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Trim46Q7TNM2 759 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Kcmf1Q80UY2 381 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Aldh3b1Q80VQ0 468 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Chn2Q80XD1 332 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gcfc2Q8BKT3 769 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Tmem214Q8BM55 687 aaKnown RBP8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Neu4Q8BZL1 478 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 RhdQ8CF94 418 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gprc5cQ8K3J9 440 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Treml1Q8K558 317 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 EtfdhQ921G7 616 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Arl8bQ9CQW2 186 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Cndp2Q9D1A2 475 aaKnown RBP8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ccdc7Q9D541 371 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Arpc3Q9JM76 178 aaKnown RBP8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Dnaja4Q9JMC3 397 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Copg2Q9QXK3 871 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Vmn1r49Q9WUF1 310 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Bscl2Q9Z2E9 383 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Megf6Q80V70 1572 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ankrd50F7BE84 1390 aa8.98□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Zfp174B9EJW5 407 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Vmn2r7E9PYL5 915 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Tex45G3XA23 500 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Prl7a2O54831 253 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 RoraP51448 523 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 AdkP55264 361 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 NcstnP57716 708 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Kcnn3P58391 732 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Kcnh8P59111 1102 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ybx1P62960 322 aaKnown RBP8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Traf3ip1Q149C2 625 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ppp1r12cQ3UMT1 782 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 4933427I04RikQ3V053 235 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Abcd2Q61285 741 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Pde1aQ61481 565 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Hdac4Q6NZM9 1076 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 CtifQ6PEE2 600 aaKnown RBP8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Rxfp1Q6R6I7 758 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Lrrc8aQ80WG5 810 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Zbtb41Q811F1 908 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Eif2aQ8BJW6 581 aaKnown RBP8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Lacc1Q8BZT9 430 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 TpbglQ8C013 384 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Leg1Q8C6C9 337 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Leng8Q8CBY3 785 aaKnown RBP8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 PpatQ8CIH9 517 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Impg1Q8R1W8 798 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Cpa5Q8R4H4 436 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Olfr1278Q8VF39 313 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Olfr435Q8VFS3 313 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Decr1Q9CQ62 335 aaKnown RBP8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Cdc42ep4Q9JM96 349 aaKnown RBP8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Cdh22Q9WTP5 813 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gm7697A0A0J9YUH2 350 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gm9495A0A0J9YUZ3 350 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Kcnk16G5E845 292 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Btbd35f22J3QN64 498 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Rdh16O54909 317 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Mcpt1P11034 246 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 GssP51855 474 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 ActbP60710 375 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Stx1bP61264 288 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Acta2P62737 377 aaKnown RBP8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Actg1P63260 375 aaKnown RBP8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Actg2P63268 376 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Actc1P68033 377 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Acta1P68134 377 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 WasP70315 520 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gm11992Q5SS90 291 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 AbrQ5SSL4 859 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Lcn3Q62471 182 aa8.97□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms