RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 FAM26EQ8N5C1 309 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 CCDC89Q8N998 374 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 SLC35B2Q8TB61 432 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 TFB1MQ8WVM0 346 aaKnown RBP9.92□□□□□ -0.82
PHGDH-222ENST00000641587 STARD8Q92502 1023 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 MIB2Q96AX9 1013 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 PSKH2Q96QS6 385 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 AGAP2Q99490 1192 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 SLC38A3Q99624 504 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 RHOXF2Q9BQY4 288 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 TMEM121Q9BTD3 319 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 ASPSCR1Q9BZE9 553 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 NOD2Q9HC29 1040 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.92□□□□□ -0.82
PHGDH-222ENST00000641587 KLHL3Q9UH77 587 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 AMACRQ9UHK6 382 aa9.92□□□□□ -0.82
PHGDH-222ENST00000641587 V9GYY5 206 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-222ENST00000641587 SPTBN1Q01082 2364 aaKnown RBP9.91□□□□□ -0.82
PHGDH-222ENST00000641587 EFCAB8A8MWE9 144 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 TTI1O43156 1089 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 ZW10O43264 779 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 RAD51CO43502 376 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 DLGAP3O95886 979 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 PEX11BO96011 259 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 FURINP09958 794 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 ZNF28P17035 718 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 RBL1P28749 1068 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 MAPK9P45984 424 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 GPR1P46091 355 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 UQCRFS1P47985 274 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 FASLGP48023 281 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 MLLT10P55197 1068 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 RAB15P59190 212 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 GPLD1P80108 840 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 MC2RQ01718 297 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 NFATC2Q13469 925 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 SQSTM1Q13501 440 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 DHX34Q14147 1143 aaKnown RBP9.91□□□□□ -0.82
PHGDH-222ENST00000641587 ZNF235Q14590 738 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 RFTN1Q14699 578 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-222ENST00000641587 TRIP13Q15645 432 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-222ENST00000641587 PYCR3Q53H96 274 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 TMCO4Q5TGY1 634 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 DRICH1Q6PGQ1 229 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-222ENST00000641587 KDELC2Q7Z4H8 507 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 MAATS1Q7Z4T9 603 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 ARHGAP22Q7Z5H3 698 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 TECPR1Q7Z6L1 1165 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 CCDC13Q8IYE1 715 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 FAM71DQ8N9W8 422 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 NSMCE1Q8WV22 266 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 APOBEC4Q8WW27 367 aaKnown RBP9.91□□□□□ -0.82
PHGDH-222ENST00000641587 NCSTNQ92542 709 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 UBXN4Q92575 508 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 SCAMP4Q969E2 229 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 KIAA1143Q96AT1 154 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-222ENST00000641587 SCARF2Q96GP6 870 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-222ENST00000641587 AHCYL2Q96HN2 611 aaKnown RBP9.91□□□□□ -0.82
PHGDH-222ENST00000641587 OLFM3Q96PB7 478 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 TRIM51Q9BSJ1 452 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 BRD8Q9H0E9 1235 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 ABCG8Q9H221 673 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 PDP2Q9P2J9 529 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 ASIC3Q9UHC3 531 aa9.91□□□□□ -0.82
PHGDH-222ENST00000641587 FEZ2Q9UHY8 353 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-222ENST00000641587 TNRC6AQ8NDV7 1962 aaKnown RBP9.91□□□□□ -0.82
PHGDH-222ENST00000641587 ZNF106Q9H2Y7 1883 aaKnown RBP9.91□□□□□ -0.82
PHGDH-222ENST00000641587 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-222ENST00000641587 FAM187AA6NFU0 413 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 INPP4BO15327 924 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 SOCS5O75159 536 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 ZNF189O75820 626 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-222ENST00000641587 PGLSO95336 258 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 KRT14P02533 472 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 PDHA1P08559 390 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 CYP2A6P11509 494 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-222ENST00000641587 TCN2P20062 427 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 MAP4P27816 1152 aaKnown RBP9.9□□□□□ -0.82
PHGDH-222ENST00000641587 VPS41P49754 854 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 SLC7A5Q01650 507 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 HHEXQ03014 270 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 PPIDQ08752 370 aaKnown RBP9.9□□□□□ -0.82
PHGDH-222ENST00000641587 ABHD18Q0P651 414 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 PRKD1Q15139 912 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-222ENST00000641587 OASLQ15646 514 aaKnown RBP9.9□□□□□ -0.82
PHGDH-222ENST00000641587 KCTD19Q17RG1 926 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-222ENST00000641587 C4orf17Q53FE4 359 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-222ENST00000641587 LRRC66Q68CR7 880 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 TIGD7Q6NT04 549 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-222ENST00000641587 CEACAM20Q6UY09 585 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 TMEM135Q86UB9 458 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 LRRC49Q8IUZ0 686 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 SFRP1Q8N474 314 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 TAB3Q8N5C8 712 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-222ENST00000641587 OR10G6Q8NH81 332 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 SPOCK2Q92563 424 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 HDAC11Q96DB2 347 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 NUDCD1Q96RS6 583 aa9.9□□□□□ -0.82
PHGDH-222ENST00000641587 MGME1Q9BQP7 344 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms