RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 HLA-EP13747 358 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 GDI1P31150 447 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 MTHFRP42898 656 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 RALGDSQ12967 914 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 POM121L1PQ3SYA9 428 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 GPRC6AQ5T6X5 926 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 PARM1Q6UWI2 310 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 Q6ZVL8 140 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 DSG4Q86SJ6 1040 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 MYO1HQ8N1T3 1032 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 KIF2BQ8N4N8 673 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 TRAM1L1Q8N609 369 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 PIP4K2CQ8TBX8 421 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 SUSD6Q92537 303 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 FGF14Q92915 247 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 CCDC28BQ9BUN5 200 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 TRMT61BQ9BVS5 477 aaKnown RBP16.23■□□□□ 0.19
PHGDH-216ENST00000641375 C1QTNF3Q9BXJ4 246 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 SARDHQ9UL12 918 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 DENND4AQ7Z401 1863 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 CFAP99D6REC4 459 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 SNX2O60749 519 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 KAT7O95251 611 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 NCF2P19878 526 aaPredicted RBP16.23■□□□□ 0.19
PHGDH-216ENST00000641375 ETV3P41162 512 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 GRIA2P42262 883 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 KCNJ2P63252 427 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 ELP6Q0PNE2 266 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 BIRC2Q13490 618 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 ZNF284Q2VY69 593 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 ITPRIPL2Q3MIP1 535 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 HENMT1Q5T8I9 393 aaKnown RBP16.23■□□□□ 0.19
PHGDH-216ENST00000641375 FRA10AC1Q70Z53 315 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 ZNF576Q9H609 170 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 THAP10Q9P2Z0 257 aaPredicted RBP16.23■□□□□ 0.19
PHGDH-216ENST00000641375 SUN2Q9UH99 717 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 TAGLN3Q9UI15 199 aa16.23■□□□□ 0.19
PHGDH-216ENST00000641375 PRR5-ARHGAP8B1AHC4 643 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 SIX3O95343 332 aaPredicted RBP16.22■□□□□ 0.19
PHGDH-216ENST00000641375 CBSLP0DN79 551 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 ITGB6P18564 788 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 CBSP35520 551 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 ARHGAP8P85298 464 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 UBAP2LQ14157 1087 aaKnown RBP16.22■□□□□ 0.19
PHGDH-216ENST00000641375 E2F5Q15329 346 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 TGFBIQ15582 683 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 PDCD2Q16342 344 aaPredicted RBP16.22■□□□□ 0.19
PHGDH-216ENST00000641375 ANKS6Q68DC2 871 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 NAIF1Q69YI7 327 aaPredicted RBP16.22■□□□□ 0.19
PHGDH-216ENST00000641375 FBXL19Q6PCT2 694 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 LIPIQ6XZB0 460 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 RPS27LQ71UM5 84 aaKnown RBP16.22■□□□□ 0.19
PHGDH-216ENST00000641375 TECPR1Q7Z6L1 1165 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 TREML1Q86YW5 311 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 NRSN1Q8IZ57 195 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 LKAAEAR1Q8TD35 194 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 DCUN1D1Q96GG9 259 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 BTBD10Q9BSF8 475 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 DYRK4Q9NR20 520 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 KCTD5Q9NXV2 234 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 NUDT4Q9NZJ9 180 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 CD274Q9NZQ7 290 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 ANKRD12Q6UB98 2062 aa16.22■□□□□ 0.19
PHGDH-216ENST00000641375 E9PBE3 544 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 KLHL41O60662 606 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 TBX10O75333 385 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 APODP05090 189 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 ENO1P06733 434 aaKnown RBP16.21■□□□□ 0.19
PHGDH-216ENST00000641375 ATP1B2P14415 290 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-216ENST00000641375 EPHA3P29320 983 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 EEF1DP29692 281 aaKnown RBP16.21■□□□□ 0.19
PHGDH-216ENST00000641375 AKT1P31749 480 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 B4GALNT1Q00973 533 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 GRIN2CQ14957 1233 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 MTSS1LQ765P7 747 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 SCAMP4Q969E2 229 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 MAELQ96JY0 434 aaKnown RBP16.21■□□□□ 0.19
PHGDH-216ENST00000641375 OR52B2Q96RD2 323 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 WDR55Q9H6Y2 383 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-216ENST00000641375 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.21■□□□□ 0.199e-8■■■□□ 19.1
PHGDH-216ENST00000641375 CLDND1Q9NY35 253 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 TRAF6Q9Y4K3 522 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 NCF1BA6NI72 391 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-216ENST00000641375 NCF1CA8MVU1 366 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-216ENST00000641375 TMEM233B4DJY2 109 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 C1QTNF3-AMACRE9PGA6 284 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 EIF3FO00303 357 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-216ENST00000641375 NEMP1O14524 444 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 FGF4P08620 206 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 RPS17P08708 135 aaKnown RBP16.21■□□□□ 0.19
PHGDH-216ENST00000641375 NCF1P14598 390 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-216ENST00000641375 EZRP15311 586 aaKnown RBP16.21■□□□□ 0.19
PHGDH-216ENST00000641375 DLX2Q07687 328 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-216ENST00000641375 LCP2Q13094 533 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 ACOX1Q15067 660 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 LSM12Q3MHD2 195 aaKnown RBP16.21■□□□□ 0.19
PHGDH-216ENST00000641375 TLDC1Q6P9B6 456 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 SFTPA1Q8IWL2 248 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 CLYBLQ8N0X4 340 aa16.21■□□□□ 0.19
PHGDH-216ENST00000641375 FAM129BQ96TA1 746 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms