RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 KLC4Q9NSK0 619 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 NLGN3Q9NZ94 848 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 GPR34Q9UPC5 381 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 DOLKQ9UPQ8 538 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 DNAJC16Q9Y2G8 782 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 CSNK1G3Q9Y6M4 447 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 LRP4O75096 1905 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 CACNA1EQ15878 2313 aa13.01□□□□□ -0.33
GTF3A-209ENST00000640289 PLXNB3Q9ULL4 1909 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 NEMP2A6NFY4 417 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 LMO7DNF2Z398 122 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 SLC30A4O14863 429 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 SIGLEC6O43699 453 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 POP7O75817 140 aaKnown RBP13□□□□□ -0.33
GTF3A-209ENST00000640289 MYF5P13349 255 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 ZNF7P17097 686 aaPredicted RBP13□□□□□ -0.33
GTF3A-209ENST00000640289 OGNP20774 298 aaKnown RBP13□□□□□ -0.33
GTF3A-209ENST00000640289 PMLP29590 882 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 SSTR1P30872 391 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 HOXD11P31277 338 aaPredicted RBP13□□□□□ -0.33
GTF3A-209ENST00000640289 NSG1P42857 185 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 SLC1A2P43004 574 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 GRK6P43250 576 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 MAGEA4P43358 317 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 TTPAP49638 278 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 CTBP1Q13363 440 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 LRP8Q14114 963 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 TYSND1Q2T9J0 566 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 BCL7AQ4VC05 210 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 ZNF789Q5FWF6 425 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 LYPLAL1Q5VWZ2 237 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 MRNIPQ6NTE8 343 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 PACS1Q6VY07 963 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 PIP4P1Q86T03 277 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 CILP2Q8IUL8 1156 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 IFT20Q8IY31 132 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 DEFB124Q8NES8 71 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 OR4C6Q8NH72 309 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 HEXDCQ8WVB3 486 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 CERS2Q96G23 380 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 TTC1Q99614 292 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 FOXP3Q9BZS1 431 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 PHACTR1Q9C0D0 580 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 FBXO6Q9NRD1 293 aaPredicted RBP13□□□□□ -0.33
GTF3A-209ENST00000640289 SPATS2LQ9NUQ6 558 aaKnown RBP13□□□□□ -0.33
GTF3A-209ENST00000640289 TAAR2Q9P1P5 351 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 SLC17A6Q9P2U8 582 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 FAM8A1Q9UBU6 413 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 MTRF1LQ9UGC7 380 aaKnown RBP13□□□□□ -0.33
GTF3A-209ENST00000640289 CDV3Q9UKY7 258 aaKnown RBP13□□□□□ -0.33
GTF3A-209ENST00000640289 PCOLCE2Q9UKZ9 415 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 NFU1Q9UMS0 254 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 EP300Q09472 2414 aaPredicted RBP13□□□□□ -0.33
GTF3A-209ENST00000640289 DNAH14Q0VDD8 3507 aa13□□□□□ -0.33
GTF3A-209ENST00000640289 UBA6A0AVT1 1052 aaPredicted RBP12.99□□□□□ -0.33
GTF3A-209ENST00000640289 B4DGG1 531 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 TM4SF5O14894 197 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 CBFA2T3O75081 653 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 NDUFS3O75489 264 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 PPARGP37231 505 aaPredicted RBP12.99□□□□□ -0.33
GTF3A-209ENST00000640289 PRLHRP49683 370 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 GPX6P59796 221 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 MPP1Q00013 466 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 CUL1Q13616 776 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 NFE2L1Q14494 772 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 UBAP2Q5T6F2 1119 aaKnown RBP12.99□□□□□ -0.33
GTF3A-209ENST00000640289 XKR5Q6UX68 686 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 FAM83HQ6ZRV2 1179 aaPredicted RBP12.99□□□□□ -0.33
GTF3A-209ENST00000640289 SDCCAG8Q86SQ7 713 aaPredicted RBP12.99□□□□□ -0.33
GTF3A-209ENST00000640289 PALM2Q8IXS6 379 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 GSPT2Q8IYD1 628 aaKnown RBP12.99□□□□□ -0.33
GTF3A-209ENST00000640289 FAM46DQ8NEK8 389 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 GSDMBQ8TAX9 411 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 BAHD1Q8TBE0 780 aaPredicted RBP12.99□□□□□ -0.33
GTF3A-209ENST00000640289 LPGAT1Q92604 370 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 ZNF514Q96K75 400 aaPredicted RBP12.99□□□□□ -0.33
GTF3A-209ENST00000640289 FMO2Q99518 471 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 TIMM29Q9BSF4 260 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 FAM167BQ9BTA0 163 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 FAM129AQ9BZQ8 928 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 P2RY12Q9H244 342 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 DPEP2Q9H4A9 486 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 OSGEPL1Q9H4B0 414 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 ANKZF1Q9H8Y5 726 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 PPANQ9NQ55 473 aaKnown RBP12.99□□□□□ -0.33
GTF3A-209ENST00000640289 SIRPGQ9P1W8 387 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 GULP1Q9UBP9 304 aa12.99□□□□□ -0.33
GTF3A-209ENST00000640289 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.99□□□□□ -0.33
GTF3A-209ENST00000640289 V9GYY5 206 aaPredicted RBP12.99□□□□□ -0.33
GTF3A-209ENST00000640289 LY6G6EA0A0G2JKS1 128 aa12.98□□□□□ -0.33
GTF3A-209ENST00000640289 PRR19A6NJB7 356 aa12.98□□□□□ -0.33
GTF3A-209ENST00000640289 IQCF5A8MTL0 148 aa12.98□□□□□ -0.33
GTF3A-209ENST00000640289 PRMT5O14744 637 aaPredicted RBP12.98□□□□□ -0.33
GTF3A-209ENST00000640289 TPP1O14773 563 aa12.98□□□□□ -0.33
GTF3A-209ENST00000640289 SNX2O60749 519 aa12.98□□□□□ -0.33
GTF3A-209ENST00000640289 PIAS1O75925 651 aa12.98□□□□□ -0.33
GTF3A-209ENST00000640289 AP2A2O94973 939 aa12.98□□□□□ -0.33
GTF3A-209ENST00000640289 EML2O95834 649 aa12.98□□□□□ -0.33
GTF3A-209ENST00000640289 S1PR4O95977 384 aa12.98□□□□□ -0.33
GTF3A-209ENST00000640289 MYBL2P10244 700 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms