RNA–Protein interactions for RNA: ENST00000635886.1

C11orf53-202, Transcript of chromosome 11 open reading frame 53, humanhuman

TSL 5

Gene C11orf53, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf53-202ENST00000635886 H7C0S8 307 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 AGRPO00253 132 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 KIF5CO60282 957 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 DXOO77932 396 aaKnown RBP13.21□□□□□ -0.29
C11orf53-202ENST00000635886 PRSS56P0CW18 603 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 HOXB3P14651 431 aaPredicted RBP13.21□□□□□ -0.29
C11orf53-202ENST00000635886 BRAFP15056 766 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 VCLP18206 1134 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 IDSP22304 550 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 RPL10P27635 214 aaKnown RBP13.21□□□□□ -0.29
C11orf53-202ENST00000635886 CSF2RBP32927 897 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 CDKN1CP49918 316 aaPredicted RBP13.21□□□□□ -0.29
C11orf53-202ENST00000635886 ARSDP51689 593 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 DRG2P55039 364 aaKnown RBP13.21□□□□□ -0.29
C11orf53-202ENST00000635886 UBE2IP63279 158 aaKnown RBP13.21□□□□□ -0.29
C11orf53-202ENST00000635886 CFHR1Q03591 330 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 CLPPQ16740 277 aaPredicted RBP13.21□□□□□ -0.29
C11orf53-202ENST00000635886 CCDC38Q502W7 563 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 ZNF574Q6ZN55 896 aaPredicted RBP13.21□□□□□ -0.29
C11orf53-202ENST00000635886 FAM83HQ6ZRV2 1179 aaPredicted RBP13.21□□□□□ -0.29
C11orf53-202ENST00000635886 RAB11FIP2Q7L804 512 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 PIM3Q86V86 326 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 AMZ2Q86W34 360 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 NXPE1Q8N323 547 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 BEND7Q8N7W2 519 aaPredicted RBP13.21□□□□□ -0.29
C11orf53-202ENST00000635886 COG1Q8WTW3 980 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 STYXQ8WUJ0 223 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 FGF11Q92914 225 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 ULK4Q96C45 1275 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 CDKN2AIPNLQ96HQ2 116 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 DCBLD2Q96PD2 775 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 ASCL3Q9NQ33 180 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 CASS4Q9NQ75 786 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 SMARCAL1Q9NZC9 954 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 ZNF624Q9P2J8 865 aaPredicted RBP13.21□□□□□ -0.29
C11orf53-202ENST00000635886 PCDHGA8Q9Y5G5 932 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 SLC30A1Q9Y6M5 507 aa13.21□□□□□ -0.29
C11orf53-202ENST00000635886 URB1O60287 2271 aaKnown RBP13.2□□□□□ -0.3
C11orf53-202ENST00000635886 USP27XA6NNY8 438 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 PLD2O14939 933 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 SGTAO43765 313 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 KCNJ13O60928 360 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 GAS8O95995 478 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 HGFP14210 728 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 PSMA3P25788 255 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 RBMS1P29558 406 aaKnown RBP13.2□□□□□ -0.3
C11orf53-202ENST00000635886 PBLDP30039 288 aaPredicted RBP13.2□□□□□ -0.3
C11orf53-202ENST00000635886 SLC19A1P41440 591 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 GPLD1P80108 840 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 BASP1P80723 227 aaKnown RBP13.2□□□□□ -0.3
C11orf53-202ENST00000635886 DMPKQ09013 629 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 EIF3IQ13347 325 aaKnown RBP13.2□□□□□ -0.3
C11orf53-202ENST00000635886 SQSTM1Q13501 440 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 NFE2L1Q14494 772 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 GPR33Q49SQ1 333 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 ZRANB3Q5FWF4 1079 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 PHF19Q5T6S3 580 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 AGAP9Q5VTM2 703 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 TTC27Q6P3X3 843 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 IGF2-ASQ6U949 168 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 ABRAXAS1Q6UWZ7 409 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 WASH2PQ6VEQ5 465 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 FBXO39Q8N4B4 442 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 AVL9Q8NBF6 648 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 SNIP1Q8TAD8 396 aaKnown RBP13.2□□□□□ -0.3
C11orf53-202ENST00000635886 SH3KBP1Q96B97 665 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 DCUN1D1Q96GG9 259 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 ZNF514Q96K75 400 aaPredicted RBP13.2□□□□□ -0.3
C11orf53-202ENST00000635886 ZNF578Q96N58 590 aaPredicted RBP13.2□□□□□ -0.3
C11orf53-202ENST00000635886 SLC46A1Q96NT5 459 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 OSBPL9Q96SU4 736 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 COPS8Q99627 209 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 TBC1D10AQ9BXI6 508 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 AP1M1Q9BXS5 423 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 WASH6PQ9NQA3 447 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 EIF2B3Q9NR50 452 aaKnown RBP13.2□□□□□ -0.3
C11orf53-202ENST00000635886 TTC7AQ9ULT0 858 aaPredicted RBP13.2□□□□□ -0.3
C11orf53-202ENST00000635886 WDR37Q9Y2I8 494 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 LOXL2Q9Y4K0 774 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 DNMT3AQ9Y6K1 912 aaPredicted RBP13.2□□□□□ -0.3
C11orf53-202ENST00000635886 WDFY3Q8IZQ1 3526 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 PKD1L2Q7Z442 2459 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 ANKRD11Q6UB99 2663 aaPredicted RBP13.2□□□□□ -0.3
C11orf53-202ENST00000635886 FREM2Q5SZK8 3169 aa13.2□□□□□ -0.3
C11orf53-202ENST00000635886 A0A087WV48 116 aa13.19□□□□□ -0.3
C11orf53-202ENST00000635886 TRBV5-4A0A0C4DH59 114 aa13.19□□□□□ -0.3
C11orf53-202ENST00000635886 PRAMEF33A0A0G2JMD5 474 aa13.19□□□□□ -0.3
C11orf53-202ENST00000635886 IGHV5-10-1A0A0J9YXX1 117 aa13.19□□□□□ -0.3
C11orf53-202ENST00000635886 HEATR9A2RTY3 570 aa13.19□□□□□ -0.3
C11orf53-202ENST00000635886 OR51F1A6NGY5 319 aa13.19□□□□□ -0.3
C11orf53-202ENST00000635886 OR52A4PA6NMU1 304 aa13.19□□□□□ -0.3
C11orf53-202ENST00000635886 TNFSF15O95150 251 aa13.19□□□□□ -0.3
C11orf53-202ENST00000635886 VIPP01282 170 aa13.19□□□□□ -0.3
C11orf53-202ENST00000635886 RALBP11234 206 aa13.19□□□□□ -0.3
C11orf53-202ENST00000635886 XRCC1P18887 633 aaPredicted RBP13.19□□□□□ -0.3
C11orf53-202ENST00000635886 MPSTP25325 297 aa13.19□□□□□ -0.3
C11orf53-202ENST00000635886 MSNP26038 577 aaKnown RBP13.19□□□□□ -0.3
C11orf53-202ENST00000635886 EIF2S3P41091 472 aaKnown RBP13.19□□□□□ -0.3
C11orf53-202ENST00000635886 PPM1FP49593 454 aaPredicted RBP13.19□□□□□ -0.3
C11orf53-202ENST00000635886 ERVPABLB-1P60509 514 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms