RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 COX4I1P13073 169 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 ERVFC1P60507 584 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 HERVK_113P63132 956 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 KLF10Q13118 480 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 PRKG2Q13237 762 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 HERC3Q15034 1050 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 LSM12Q3MHD2 195 aaKnown RBP7.09□□□□□ -1.27
BRCA1-230ENST00000634433 ZNF678Q5SXM1 525 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 FBXL19Q6PCT2 694 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 TXNDC11Q6PKC3 985 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 TMEM207Q6UWW9 146 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 NET1Q7Z628 596 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-230ENST00000634433 CUZD1Q86UP6 607 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 RYBPQ8N488 228 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-230ENST00000634433 WFDC5Q8TCV5 224 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 AGR3Q8TD06 166 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 ACTRT2Q8TDY3 377 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 HERVK_113Q902F9 699 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 BADQ92934 168 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 BHMTQ93088 406 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 OTUB2Q96DC9 234 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 PHF21BQ96EK2 531 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 ANKRD27Q96NW4 1050 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 ERVK-6Q9BXR3 956 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 NUF2Q9BZD4 464 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 CEP44Q9C0F1 390 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 BRD9Q9H8M2 597 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 ZFYVE1Q9HBF4 777 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 NDE1Q9NXR1 346 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 C6orf203Q9P0P8 240 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-230ENST00000634433 SUCOQ9UBS9 1254 aaKnown RBP7.09□□□□□ -1.27
BRCA1-230ENST00000634433 RNF112Q9ULX5 631 aa7.09□□□□□ -1.27
BRCA1-230ENST00000634433 OAS3Q9Y6K5 1087 aaKnown RBP7.09□□□□□ -1.27
BRCA1-230ENST00000634433 E5RI56 91 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 SLC9A3R1O14745 358 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 ZBTB14O43829 449 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 GUCA1CO95843 209 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 ZNF7P17097 686 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 ITGALP20701 1170 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 SP100P23497 879 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 CPA2P48052 419 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 IL2P60568 153 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 IRX1P78414 480 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 TIAL1Q01085 375 aaKnown RBP eCLIP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 PEX6Q13608 980 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 WSCD2Q2TBF2 565 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 TRMT5Q32P41 509 aaKnown RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 PITRM1Q5JRX3 1037 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 ZDHHC20Q5W0Z9 365 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 GRAMD4Q6IC98 578 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 PDE12Q6L8Q7 609 aaKnown RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 PIM3Q86V86 326 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 CBARPQ8N350 705 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 PCDH20Q8N6Y1 951 aaKnown RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 NAXEQ8NCW5 288 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 OR2AP1Q8NGE2 309 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 RP9Q8TA86 221 aaKnown RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 SHKBP1Q8TBC3 707 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 SPPL3Q8TCT6 385 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 MAPK15Q8TD08 544 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 SLC22A17Q8WUG5 538 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 KCNJ9Q92806 393 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 STMN2Q93045 179 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 MAELQ96JY0 434 aaKnown RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 OR52B2Q96RD2 323 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 THTPAQ9BU02 230 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 CPEB1Q9BZB8 566 aaKnown RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 TM6SF2Q9BZW4 377 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 DENND2DQ9H6A0 471 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 CYP4F12Q9HCS2 524 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 PFDN4Q9NQP4 134 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 MAN1C1Q9NR34 630 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 TDP1Q9NUW8 608 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 A0A0J9YYE9 177 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 NEMP2A6NFY4 417 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 NEMP1O14524 444 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 PRMT5O14744 637 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 SMAD6O43541 496 aaKnown RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 BRINP1O60477 761 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 GPC4O75487 556 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 SUPT7LO94864 414 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 POP4O95707 220 aaKnown RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 TRBC1P01850 177 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 POU2F2P09086 479 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 GFAPP14136 432 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 CHRM3P20309 590 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 NFKBIAP25963 317 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 EPHA3P29320 983 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 CD70P32970 193 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 XIAPP98170 497 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 ZNF267Q14586 743 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 MAPRE2Q15555 327 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 PDCD2Q16342 344 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 MYLK3Q32MK0 819 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 GPR33Q49SQ1 333 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 SWT1Q5T5J6 900 aaKnown RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 FAM205BPQ63HN1 556 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 PAQR3Q6TCH7 311 aa7.08□□□□□ -1.28
BRCA1-230ENST00000634433 EFL1Q7Z2Z2 1120 aaKnown RBP7.08□□□□□ -1.28
BRCA1-230ENST00000634433 CAMK1DQ8IU85 385 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms