RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 TMEM98Q9Y2Y6 226 aa17.58■□□□□ 0.41
PTCHD3-202ENST00000622555 CCDC163A0A0D9SF12 145 aa17.58■□□□□ 0.4
PTCHD3-202ENST00000622555 POM121BA6NF01 834 aa17.58■□□□□ 0.4
PTCHD3-202ENST00000622555 F8W8V4 182 aa17.58■□□□□ 0.4
PTCHD3-202ENST00000622555 PRAMEF26H0Y7S4 382 aa17.58■□□□□ 0.4
PTCHD3-202ENST00000622555 VEGFDO43915 354 aa17.58■□□□□ 0.4
PTCHD3-202ENST00000622555 SLC35E2BP0CK96 405 aa17.58■□□□□ 0.4
PTCHD3-202ENST00000622555 MYCLP1P12525 358 aaPredicted RBP17.58■□□□□ 0.4
PTCHD3-202ENST00000622555 TDGF1P13385 188 aa17.58■□□□□ 0.4
PTCHD3-202ENST00000622555 GMPRP36959 345 aa17.58■□□□□ 0.4
PTCHD3-202ENST00000622555 CSRP3P50461 194 aa17.58■□□□□ 0.4
PTCHD3-202ENST00000622555 SIDT2Q8NBJ9 832 aaKnown RBP17.58■□□□□ 0.4
PTCHD3-202ENST00000622555 CADM4Q8NFZ8 388 aa17.58■□□□□ 0.4
PTCHD3-202ENST00000622555 LKAAEAR1Q8TD35 194 aa17.58■□□□□ 0.4
PTCHD3-202ENST00000622555 ALKBH8Q96BT7 664 aaKnown RBP17.58■□□□□ 0.4
PTCHD3-202ENST00000622555 SELENOSQ9BQE4 189 aa17.58■□□□□ 0.4
PTCHD3-202ENST00000622555 GALPQ9UBC7 116 aa17.58■□□□□ 0.4
PTCHD3-202ENST00000622555 TRMT6Q9UJA5 497 aaKnown RBP17.58■□□□□ 0.4
PTCHD3-202ENST00000622555 ACOT9Q9Y305 439 aa17.58■□□□□ 0.4
PTCHD3-202ENST00000622555 GON4LQ3T8J9 2241 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 METTL12A8MUP2 240 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 H0Y8X5 98 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 CACNB4O00305 520 aaPredicted RBP17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 QSOX1O00391 747 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 COPEO14579 308 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 NR1D1P20393 614 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 BCKDHBP21953 392 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 CTSCP53634 463 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 IRF9Q00978 393 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 UGT3A1Q6NUS8 523 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 TMEM220Q6QAJ8 160 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 WDR5BQ86VZ2 330 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 SPNS2Q8IVW8 549 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 BANPQ8N9N5 519 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 TMEM145Q8NBT3 493 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 FOXJ1Q92949 421 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 APOPT1Q96IL0 206 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 PANX3Q96QZ0 392 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 TSSK1BQ9BXA7 367 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 CAPS2Q9BXY5 557 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 POPDC3Q9HBV1 291 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 SSU72Q9NP77 194 aaKnown RBP17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 THADAQ6YHU6 1953 aa17.57■□□□□ 0.4
PTCHD3-202ENST00000622555 A0A087X1B8 175 aa17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 A0A1W2PPC4 97 aa17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 MEI4A8MW99 385 aa17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 SGTAO43765 313 aa17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 DNAJC6O75061 913 aa17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 ZNF8P17098 575 aaPredicted RBP17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 CD9P21926 228 aa17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 SKIV2L2P42285 1042 aaKnown RBP17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 PPARDQ03181 441 aa17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 GCNT7Q6ZNI0 430 aa17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 BMP8AQ7Z5Y6 402 aa17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 TRAPPC5Q8IUR0 188 aa17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 MAML2Q8IZL2 1156 aaPredicted RBP17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 BEND7Q8N7W2 519 aaPredicted RBP17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 CD200R1Q8TD46 325 aa17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 BMFQ96LC9 184 aa17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 EPHX3Q9H6B9 360 aa17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 SMG5Q9UPR3 1016 aaKnown RBP17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 ANKRD6Q9Y2G4 727 aa17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 HS3ST3A1Q9Y663 406 aa17.56■□□□□ 0.4
PTCHD3-202ENST00000622555 TMEM120BA0PK00 339 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 TOP3BO95985 862 aaKnown RBP17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 FTH1P02794 183 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 CCT5P48643 541 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 PRLHRP49683 370 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 CLCN7P51798 805 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 PPP2R2AP63151 447 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 PAQR3Q6TCH7 311 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 CCDC91Q7Z6B0 441 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 TBC1D1Q86TI0 1168 aaPredicted RBP17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 LONP2Q86WA8 852 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 GIMAP7Q8NHV1 300 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 ZNF514Q96K75 400 aaPredicted RBP17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 HSPA12BQ96MM6 686 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 SLC30A3Q99726 388 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 IQCGQ9H095 443 aaKnown RBP17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 SPATS2LQ9NUQ6 558 aaKnown RBP17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 DHRS7Q9Y394 339 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 TYROBPO43914 113 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 MAGEC1O60732 1142 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 ZNF37AP17032 561 aaPredicted RBP17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 CD27P26842 260 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 CRHR1P34998 444 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 KIAA1024LP59773 190 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 PFN3P60673 137 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 BCL7AQ4VC05 210 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 CRTC3Q6UUV7 619 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 TMEM207Q6UWW9 146 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 OTOAQ7RTW8 1153 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 TMEFF1Q8IYR6 380 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 ARFGAP2Q8N6H7 521 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 KCTD4Q8WVF5 259 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 INPP5DQ92835 1189 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 TSNARE1Q96NA8 513 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 ORAI3Q9BRQ5 295 aa17.55■□□□□ 0.4
PTCHD3-202ENST00000622555 SYTL2Q9HCH5 934 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms