RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 FAM13CQ8NE31 585 aa15.55■□□□□ 0.08
CPSF1-213ENST00000620219 SCRN2Q96FV2 425 aa15.55■□□□□ 0.08
CPSF1-213ENST00000620219 FAR2Q96K12 515 aa15.55■□□□□ 0.08
CPSF1-213ENST00000620219 OSBPL6Q9BZF3 934 aa15.55■□□□□ 0.08
CPSF1-213ENST00000620219 ZCCHC2Q9C0B9 1178 aaKnown RBP15.55■□□□□ 0.08
CPSF1-213ENST00000620219 ELOVL6Q9H5J4 265 aa15.55■□□□□ 0.08
CPSF1-213ENST00000620219 SPATS2LQ9NUQ6 558 aaKnown RBP15.55■□□□□ 0.08
CPSF1-213ENST00000620219 VTI1BQ9UEU0 232 aa15.55■□□□□ 0.08
CPSF1-213ENST00000620219 CAPN8A6NHC0 703 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 AZIN1O14977 448 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 SLC2A4P14672 509 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 ZNF140P52738 457 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-213ENST00000620219 FOXD4Q12950 439 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-213ENST00000620219 GPR65Q8IYL9 337 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 NXPE1Q8N323 547 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 GALPQ9UBC7 116 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 G3V2L1 256 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 CD72P21854 359 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 MSLNQ13421 630 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-213ENST00000620219 ZNF805Q5CZA5 627 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 PIH1D2Q8WWB5 315 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 NSUN5Q96P11 429 aaKnown RBP15.54■□□□□ 0.08
CPSF1-213ENST00000620219 SERPINI1Q99574 410 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 NOL11Q9H8H0 719 aaKnown RBP15.54■□□□□ 0.08
CPSF1-213ENST00000620219 SAR1AQ9NR31 198 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 RIC8BQ9NVN3 520 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 NUMBLQ9Y6R0 609 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 NUMA1Q14980 2115 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 KLF11O14901 512 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 VIPR1P32241 457 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 RPIAP49247 311 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 CLCQ05315 142 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 ELP6Q0PNE2 266 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 ZNF77Q15935 545 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 NAIF1Q69YI7 327 aaPredicted RBP15.54■□□□□ 0.08
CPSF1-213ENST00000620219 SPATA24Q86W54 205 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 OR2A12Q8NGT7 310 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 FBXO27Q8NI29 283 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 MAPK15Q8TD08 544 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 ZNF576Q9H609 170 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 PIF1Q9H611 641 aa15.54■□□□□ 0.08
CPSF1-213ENST00000620219 MROH6A6NGR9 719 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 MAGEC1O60732 1142 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 RCN1Q15293 331 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 RALGPS1Q5JS13 557 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 LYPLAL1Q5VWZ2 237 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 SUGP1Q8IWZ8 645 aaKnown RBP15.53■□□□□ 0.08
CPSF1-213ENST00000620219 CNDP1Q96KN2 507 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 LRGUKQ96M69 825 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 ZNF641Q96N77 438 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-213ENST00000620219 KCTD5Q9NXV2 234 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 ZDHHC3Q9NYG2 299 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 FBXL21Q9UKT6 434 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 SERPINA6P08185 405 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 BMP1P13497 986 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 HGFP14210 728 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 LSM12Q3MHD2 195 aaKnown RBP15.53■□□□□ 0.08
CPSF1-213ENST00000620219 TERB1Q8NA31 727 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 CADM1Q9BY67 442 aaKnown RBP15.53■□□□□ 0.08
CPSF1-213ENST00000620219 ZNF212Q9UDV6 495 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 EDDM13A0A1B0GTR0 161 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 RASSF9O75901 435 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 PRKG2Q13237 762 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 FASTKQ14296 549 aaKnown RBP15.53■□□□□ 0.08
CPSF1-213ENST00000620219 ZNF234Q14588 700 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 GPRIN3Q6ZVF9 776 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 ASZ1Q8WWH4 475 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 LPGAT1Q92604 370 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 KCNA7Q96RP8 456 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 GIMAP2Q9UG22 337 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 LIMD1Q9UGP4 676 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 CORO1CQ9ULV4 474 aaPredicted RBP15.53■□□□□ 0.08
CPSF1-213ENST00000620219 A0A1W2PQ67 120 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 CACNG3O60359 315 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 WDR47O94967 919 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 OR4F21O95013 312 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 T-ENOLP0DO92 83 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 THRAP10827 490 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 CR2P20023 1033 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 PKNOX1P55347 436 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 RPL26P61254 145 aaKnown RBP15.53■□□□□ 0.08
CPSF1-213ENST00000620219 GPR33Q49SQ1 333 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 NXPE3Q969Y0 559 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 LRMDAQ9H2I8 198 aa15.53■□□□□ 0.08
CPSF1-213ENST00000620219 RPL26L1Q9UNX3 145 aaKnown RBP15.53■□□□□ 0.08
CPSF1-213ENST00000620219 FTH1P02794 183 aa15.52■□□□□ 0.08
CPSF1-213ENST00000620219 CATP04040 527 aaKnown RBP15.52■□□□□ 0.08
CPSF1-213ENST00000620219 PCNAP12004 261 aa15.52■□□□□ 0.08
CPSF1-213ENST00000620219 EPB42P16452 691 aa15.52■□□□□ 0.08
CPSF1-213ENST00000620219 RBBP5Q15291 538 aaKnown RBP15.52■□□□□ 0.08
CPSF1-213ENST00000620219 DUSP6Q16828 381 aa15.52■□□□□ 0.08
CPSF1-213ENST00000620219 DNAL1Q4LDG9 190 aa15.52■□□□□ 0.08
CPSF1-213ENST00000620219 ACSBG2Q5FVE4 666 aa15.52■□□□□ 0.08
CPSF1-213ENST00000620219 SCUBE1Q8IWY4 988 aa15.52■□□□□ 0.08
CPSF1-213ENST00000620219 PHACTR4Q8IZ21 702 aa15.52■□□□□ 0.08
CPSF1-213ENST00000620219 CLYBLQ8N0X4 340 aa15.52■□□□□ 0.08
CPSF1-213ENST00000620219 SPDYE1Q8NFV5 336 aaPredicted RBP15.52■□□□□ 0.08
CPSF1-213ENST00000620219 RSRC1Q96IZ7 334 aaKnown RBP15.52■□□□□ 0.08
CPSF1-213ENST00000620219 ASB16Q96NS5 453 aa15.52■□□□□ 0.08
CPSF1-213ENST00000620219 TRBV23OR9-2A0A075B6M9 112 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms