RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 NOMO1Q15155 1222 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 SNAP47Q5SQN1 464 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 FAM182AQ5T1J6 154 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 RANBP10Q6VN20 620 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 AMZ2Q86W34 360 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 ZNF547Q8IVP9 402 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 CDKL3Q8IVW4 592 aaPredicted RBP9.52□□□□□ -0.89
TARDBP-218ENST00000617172 CACNA2D3Q8IZS8 1091 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 TTC30BQ8N4P2 665 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 BEND7Q8N7W2 519 aaPredicted RBP9.52□□□□□ -0.89
TARDBP-218ENST00000617172 BMPERQ8N8U9 685 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 DDHD1Q8NEL9 900 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 BLOC1S5Q8TDH9 187 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 KRT35Q92764 455 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 OXNAD1Q96HP4 312 aaPredicted RBP9.52□□□□□ -0.89
TARDBP-218ENST00000617172 C19orf43Q9BQ61 176 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 OSBPL8Q9BZF1 889 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 SLC40A1Q9NP59 571 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 TMPRSS11EQ9UL52 423 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 DNAJC16Q9Y2G8 782 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 PCDHGA4Q9Y5G9 962 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 AHCTF1Q8WYP5 2266 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 KIF26BQ2KJY2 2108 aa9.52□□□□□ -0.89
TARDBP-218ENST00000617172 SOWAHDA6NJG2 315 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 PJA2O43164 708 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 MTX2O75431 263 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 CRTAMO95727 393 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 AGTP01019 485 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 PYGMP11217 842 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 LPOP22079 712 aaPredicted RBP9.51□□□□□ -0.89
TARDBP-218ENST00000617172 RPL10P27635 214 aaKnown RBP9.51□□□□□ -0.89
TARDBP-218ENST00000617172 RBL1P28749 1068 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 CHRNA4P43681 627 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 MAPK9P45984 424 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 MARCKSL1P49006 195 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 ARSDP51689 593 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 EIF3EP60228 445 aaKnown RBP9.51□□□□□ -0.89
TARDBP-218ENST00000617172 IL11RAQ14626 422 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 TAF1AQ15573 450 aaPredicted RBP9.51□□□□□ -0.89
TARDBP-218ENST00000617172 CHRNA6Q15825 494 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 LONRF2Q1L5Z9 754 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 KHDC1Q4VXA5 237 aaKnown RBP9.51□□□□□ -0.89
TARDBP-218ENST00000617172 ANKRD20A2Q5SQ80 823 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 ANKRD20A1Q5TYW2 823 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 ANKRD20A3Q5VUR7 823 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 ANKS6Q68DC2 871 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 CYB5D1Q6P9G0 228 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 KLHL35Q6PF15 583 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 DARS2Q6PI48 645 aaKnown RBP9.51□□□□□ -0.89
TARDBP-218ENST00000617172 FAM151BQ6UXP7 276 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 C11orf96Q7Z7L8 435 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 VASH2Q86V25 355 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 SYCE1Q8N0S2 351 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 TTC13Q8NBP0 860 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 ACTL9Q8TC94 416 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 ZNF398Q8TD17 642 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 UBE2Q2Q8WVN8 375 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 ZFPM2Q8WW38 1151 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 KIAA1143Q96AT1 154 aaPredicted RBP9.51□□□□□ -0.89
TARDBP-218ENST00000617172 CXorf40BQ96DE9 158 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 RTP4Q96DX8 246 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 ZDHHC12Q96GR4 267 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 C9orf72Q96LT7 481 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 TBC1D10AQ9BXI6 508 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 SPRY4Q9C004 299 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 RAB33BQ9H082 229 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 SMOXQ9NWM0 555 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 SCHIP1Q9P0W5 487 aaPredicted RBP9.51□□□□□ -0.89
TARDBP-218ENST00000617172 ZNF624Q9P2J8 865 aaPredicted RBP9.51□□□□□ -0.89
TARDBP-218ENST00000617172 EPHA6Q9UF33 1036 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 FEZ2Q9UHY8 353 aaPredicted RBP9.51□□□□□ -0.89
TARDBP-218ENST00000617172 PILRAQ9UKJ1 303 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 DUSP10Q9Y6W6 482 aa9.51□□□□□ -0.89
TARDBP-218ENST00000617172 MN1Q10571 1320 aaPredicted RBP9.51□□□□□ -0.89
TARDBP-218ENST00000617172 MACROD2A1Z1Q3 448 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 RCCD1A6NED2 376 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 GOLGA6L9A6NEM1 432 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 MIF4GDA9UHW6 222 aaKnown RBP9.5□□□□□ -0.89
TARDBP-218ENST00000617172 UGT1A9O60656 530 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 RAD1O60671 282 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 POP7O75817 140 aaKnown RBP9.5□□□□□ -0.89
TARDBP-218ENST00000617172 PTMAP06454 111 aaKnown RBP9.5□□□□□ -0.89
TARDBP-218ENST00000617172 RBP3P10745 1247 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 PLA2G2AP14555 144 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 BRAFP15056 766 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 UGT1A6P19224 532 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 MSH3P20585 1137 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 UGT1A1P22309 533 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 UGT1A4P22310 534 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 ADRA1AP35348 466 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 HADHAP40939 763 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 VAV2P52735 878 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 OTUD4Q01804 1114 aaKnown RBP9.5□□□□□ -0.89
TARDBP-218ENST00000617172 ABHD18Q0P651 414 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 SEPT7Q16181 437 aaKnown RBP9.5□□□□□ -0.89
TARDBP-218ENST00000617172 PLA2G4EQ3MJ16 856 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 GPRC6AQ5T6X5 926 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 METRNLQ641Q3 311 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 TMEM220Q6QAJ8 160 aa9.5□□□□□ -0.89
TARDBP-218ENST00000617172 KIAA1328Q86T90 577 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms