RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 RPIAP49247 311 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 ACADVLP49748 655 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 DUSP3P51452 185 aaPredicted RBP16.36■□□□□ 0.21
IRF1-211ENST00000613424 CLCNKAP51800 687 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 SLC7A5Q01650 507 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 SEMA3AQ14563 771 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 ITIH4Q14624 930 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 BBS9Q3SYG4 887 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 DNAJC21Q5F1R6 531 aaKnown RBP16.36■□□□□ 0.21
IRF1-211ENST00000613424 LYPLAL1Q5VWZ2 237 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 KIAA0930Q6ICG6 404 aaPredicted RBP16.36■□□□□ 0.21
IRF1-211ENST00000613424 CTAGE6Q86UF2 777 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 CTAGE4Q8IX94 777 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 PDIK1LQ8N165 341 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 MMGT1Q8N4V1 131 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 BEND7Q8N7W2 519 aaPredicted RBP16.36■□□□□ 0.21
IRF1-211ENST00000613424 KYQ8NBH2 561 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.36■□□□□ 0.21
IRF1-211ENST00000613424 STAMBPL1Q96FJ0 436 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 EBNA1BP2Q99848 306 aaKnown RBP16.36■□□□□ 0.21
IRF1-211ENST00000613424 RAB17Q9H0T7 212 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 MARCH4Q9P2E8 410 aaPredicted RBP16.36■□□□□ 0.21
IRF1-211ENST00000613424 TBC1D29Q9UFV1 150 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 PADI4Q9UM07 663 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 APOBEC2Q9Y235 224 aaKnown RBP16.36■□□□□ 0.21
IRF1-211ENST00000613424 DNAJC16Q9Y2G8 782 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 RPS6KL1Q9Y6S9 549 aa16.36■□□□□ 0.21
IRF1-211ENST00000613424 ZFC3H1O60293 1989 aaKnown RBP16.35■□□□□ 0.21
IRF1-211ENST00000613424 ZCWPW2A0A1B0GU75 182 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 CPED1A4D0V7 1026 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 EME2A4GXA9 379 aaPredicted RBP16.35■□□□□ 0.21
IRF1-211ENST00000613424 GOLGA8KD6RF30 607 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 GOLGA8TH3BQL2 631 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 SNX2O60749 519 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 KCNJ13O60928 360 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 USP1O94782 785 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 EML2O95834 649 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 PAMP19021 973 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 NSG1P42857 185 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 ARL4CP56559 192 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 CALCOCO2Q13137 446 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 TRADDQ15628 312 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 BCL7AQ4VC05 210 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 CCDC157Q569K6 752 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 C8orf74Q6P047 294 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 GUSBP11Q6P575 273 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 CERS6Q6ZMG9 384 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 LDB1Q86U70 411 aaPredicted RBP16.35■□□□□ 0.21
IRF1-211ENST00000613424 AMZ2Q86W34 360 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 IGDCC3Q8IVU1 814 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 NAGSQ8N159 534 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 CLDN19Q8N6F1 224 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 PATE1Q8WXA2 126 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 ZNF669Q96BR6 464 aaPredicted RBP16.35■□□□□ 0.21
IRF1-211ENST00000613424 TTC1Q99614 292 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 EVA1BQ9NVM1 165 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 PCDHGA1Q9Y5H4 931 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 PRSS21Q9Y6M0 314 aa16.35■□□□□ 0.21
IRF1-211ENST00000613424 TRBV23OR9-2A0A075B6M9 112 aa16.34■□□□□ 0.21
IRF1-211ENST00000613424 PRR19A6NJB7 356 aa16.34■□□□□ 0.21
IRF1-211ENST00000613424 OR1I1O60431 355 aa16.34■□□□□ 0.21
IRF1-211ENST00000613424 DKK1O94907 266 aa16.34■□□□□ 0.21
IRF1-211ENST00000613424 POLBP06746 335 aa16.34■□□□□ 0.21
IRF1-211ENST00000613424 VCLP18206 1134 aa16.34■□□□□ 0.21
IRF1-211ENST00000613424 PGAM1P18669 254 aa16.34■□□□□ 0.21
IRF1-211ENST00000613424 PPARGP37231 505 aaPredicted RBP16.34■□□□□ 0.21
IRF1-211ENST00000613424 PRLHRP49683 370 aa16.34■□□□□ 0.21
IRF1-211ENST00000613424 HLTFQ14527 1009 aaKnown RBP eCLIP16.34■□□□□ 0.21
IRF1-211ENST00000613424 SMAD1Q15797 465 aaKnown RBP16.34■□□□□ 0.21
IRF1-211ENST00000613424 HIF1AQ16665 826 aa16.34■□□□□ 0.21
IRF1-211ENST00000613424 C14orf28Q4W4Y0 310 aa16.34■□□□□ 0.21
IRF1-211ENST00000613424 AARS2Q5JTZ9 985 aaKnown RBP16.34■□□□□ 0.21
IRF1-211ENST00000613424 HP1BP3Q5SSJ5 553 aaPredicted RBP16.34■□□□□ 0.21
IRF1-211ENST00000613424 PACS1Q6VY07 963 aa16.34■□□□□ 0.21
IRF1-211ENST00000613424 C17orf82Q86X59 251 aaPredicted RBP16.34■□□□□ 0.21
IRF1-211ENST00000613424 CEP112Q8N8E3 955 aa16.34■□□□□ 0.21
IRF1-211ENST00000613424 NOA1Q8NC60 698 aaKnown RBP16.34■□□□□ 0.21
IRF1-211ENST00000613424 IFI44Q8TCB0 444 aa16.34■□□□□ 0.21
IRF1-211ENST00000613424 LINC00615Q96LM1 132 aaPredicted RBP16.34■□□□□ 0.21
IRF1-211ENST00000613424 OSGEPL1Q9H4B0 414 aa16.34■□□□□ 0.21
IRF1-211ENST00000613424 PRDM8Q9NQV8 689 aa16.34■□□□□ 0.21
IRF1-211ENST00000613424 GRHL1Q9NZI5 618 aa16.34■□□□□ 0.21
IRF1-211ENST00000613424 IL1RAPL1Q9NZN1 696 aa16.34■□□□□ 0.21
IRF1-211ENST00000613424 FAM169AQ9Y6X4 670 aa16.34■□□□□ 0.21
IRF1-211ENST00000613424 A6NCN8 305 aa16.33■□□□□ 0.2
IRF1-211ENST00000613424 RFPL3O75679 317 aa16.33■□□□□ 0.2
IRF1-211ENST00000613424 AP2A2O94973 939 aa16.33■□□□□ 0.2
IRF1-211ENST00000613424 PBLDP30039 288 aaPredicted RBP16.33■□□□□ 0.2
IRF1-211ENST00000613424 ELK3P41970 407 aa16.33■□□□□ 0.2
IRF1-211ENST00000613424 TTPAP49638 278 aa16.33■□□□□ 0.2
IRF1-211ENST00000613424 DRG2P55039 364 aaKnown RBP16.33■□□□□ 0.2
IRF1-211ENST00000613424 MAZP56270 477 aaKnown RBP16.33■□□□□ 0.2
IRF1-211ENST00000613424 DMPKQ09013 629 aa16.33■□□□□ 0.2
IRF1-211ENST00000613424 ILKQ13418 452 aa16.33■□□□□ 0.2
IRF1-211ENST00000613424 NFE2L1Q14494 772 aa16.33■□□□□ 0.2
IRF1-211ENST00000613424 PERM1Q5SV97 790 aa16.33■□□□□ 0.2
IRF1-211ENST00000613424 NEPROQ6NW34 567 aa16.33■□□□□ 0.2
IRF1-211ENST00000613424 IYDQ6PHW0 289 aa16.33■□□□□ 0.2
IRF1-211ENST00000613424 FAM83HQ6ZRV2 1179 aaPredicted RBP16.33■□□□□ 0.2
IRF1-211ENST00000613424 EFL1Q7Z2Z2 1120 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms