RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 SUPT3HB4E1H0 165 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 GRM6O15303 877 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 SUPT3HO75486 399 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 RHOBTB1O94844 696 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 EEF1DP29692 281 aaKnown RBP14.55□□□□□ -0.08
CDH1-213ENST00000612417 GRIA3P42263 894 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 RAD51Q06609 339 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 ANKS6Q68DC2 871 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 SPATA19Q7Z5L4 167 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 CANT1Q8WVQ1 401 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 TUBGCP3Q96CW5 907 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 KCNA7Q96RP8 456 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 SLC29A1Q99808 456 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 MUC13Q9H3R2 512 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 NOL11Q9H8H0 719 aaKnown RBP14.55□□□□□ -0.08
CDH1-213ENST00000612417 HCFC1R1Q9NWW0 138 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 ACTR3BQ9P1U1 418 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 LSM7Q9UK45 103 aaKnown RBP14.55□□□□□ -0.08
CDH1-213ENST00000612417 VPS9D1Q9Y2B5 631 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 SPO11Q9Y5K1 396 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 GPR45Q9Y5Y3 372 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 ANKRD12Q6UB98 2062 aa14.55□□□□□ -0.08
CDH1-213ENST00000612417 A0A1B0GVM2 712 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 TYW5A2RUC4 315 aaKnown RBP14.54□□□□□ -0.08
CDH1-213ENST00000612417 ZNF839A8K0R7 811 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 H3BNC9 293 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 HNRNPRO43390 633 aaKnown RBP14.54□□□□□ -0.08
CDH1-213ENST00000612417 TBL1XO60907 577 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 ECI2O75521 394 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 RFPL2O75678 378 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 ARHGEF15O94989 841 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 IMPDH2P12268 514 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 HGFP14210 728 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 ATP6V1B1P15313 513 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 CR2P20023 1033 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 SLC6A2P23975 617 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 IRS1P35568 1242 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 UBE3AQ05086 875 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 MYLK3Q32MK0 819 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 TBC1D25Q3MII6 688 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 VPS26BQ4G0F5 336 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 INTS11Q5TA45 600 aaKnown RBP14.54□□□□□ -0.08
CDH1-213ENST00000612417 B3GNT6Q6ZMB0 384 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 CHST9Q7L1S5 443 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 EFL1Q7Z2Z2 1120 aaKnown RBP14.54□□□□□ -0.08
CDH1-213ENST00000612417 NKAPQ8N5F7 415 aaKnown RBP14.54□□□□□ -0.08
CDH1-213ENST00000612417 ZFP28Q8NHY6 868 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 BHMTQ93088 406 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 FUBP1Q96AE4 644 aaKnown RBP14.54□□□□□ -0.08
CDH1-213ENST00000612417 LRRC58Q96CX6 371 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 LRCH3Q96II8 777 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 SLC45A3Q96JT2 553 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 CIB1Q99828 191 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 HAUS8Q9BT25 410 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 LRRC3Q9BY71 257 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 TRIM54Q9BYV2 358 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 MUC3BQ9H195 1237 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 CCDC68Q9H2F9 335 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 PNPLA3Q9NST1 481 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 CFAP97Q9P2B7 532 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 UBA6A0AVT1 1052 aaPredicted RBP14.54□□□□□ -0.08
CDH1-213ENST00000612417 HTRA2O43464 458 aaPredicted RBP14.54□□□□□ -0.08
CDH1-213ENST00000612417 TIPRLO75663 272 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 H6PDO95479 791 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 PRSS56P0CW18 603 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 OXCT1P55809 520 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 ZXDBP98169 803 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 RCAN2Q14206 197 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 XKR7Q5GH72 579 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 NHSL2Q5HYW2 709 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 PITRM1Q5JRX3 1037 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 C9orf50Q5SZB4 431 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 FAM109BQ6ICB4 259 aaPredicted RBP14.54□□□□□ -0.08
CDH1-213ENST00000612417 TXNDC11Q6PKC3 985 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 ZBTB49Q6ZSB9 765 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 GLT6D1Q7Z4J2 308 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 AMIGO2Q86SJ2 522 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 CARNMT1Q8N4J0 409 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 MFSD2AQ8NA29 543 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 OR4K2Q8NGD2 314 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 ADAMTS19Q8TE59 1207 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 NMD3Q96D46 503 aaKnown RBP14.54□□□□□ -0.08
CDH1-213ENST00000612417 NSMCE3Q96MG7 304 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 CINPQ9BW66 212 aaPredicted RBP14.54□□□□□ -0.08
CDH1-213ENST00000612417 TMEM45AQ9NWC5 275 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 DUS2Q9NX74 493 aaKnown RBP14.54□□□□□ -0.08
CDH1-213ENST00000612417 CMTM6Q9NX76 183 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 UBA2Q9UBT2 640 aaPredicted RBP14.54□□□□□ -0.08
CDH1-213ENST00000612417 GIMAP2Q9UG22 337 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 IKZF3Q9UKT9 509 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 TMCO1Q9UM00 188 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 PCDHA9Q9Y5H5 950 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 AK5Q9Y6K8 562 aa14.54□□□□□ -0.08
CDH1-213ENST00000612417 ZFC3H1O60293 1989 aaKnown RBP14.53□□□□□ -0.08
CDH1-213ENST00000612417 CHD9Q3L8U1 2897 aa14.53□□□□□ -0.08
CDH1-213ENST00000612417 A0A1B0GTL3 188 aa14.53□□□□□ -0.08
CDH1-213ENST00000612417 A0A1W2PP18 115 aa14.53□□□□□ -0.08
CDH1-213ENST00000612417 DHRS12A0PJE2 317 aa14.53□□□□□ -0.08
CDH1-213ENST00000612417 ARHGAP10A1A4S6 786 aa14.53□□□□□ -0.08
CDH1-213ENST00000612417 ILVBLA1L0T0 632 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms