RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 DNAJC16Q9Y2G8 782 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 PCYT1BQ9Y5K3 369 aaPredicted RBP11.37□□□□□ -0.59
CCDC12-209ENST00000604164 ASXL3Q9C0F0 2248 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 RP1P56715 2156 aa11.37□□□□□ -0.59
CCDC12-209ENST00000604164 ARHGEF17Q96PE2 2063 aaPredicted RBP11.36□□□□□ -0.59
CCDC12-209ENST00000604164 SPEGQ15772 3267 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 TRBV23OR9-2A0A075B6M9 112 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 LILRA5A6NI73 299 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 AGAP14A8MT82 685 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 QSOX1O00391 747 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 GAPDHSO14556 408 aaPredicted RBP11.36□□□□□ -0.59
CCDC12-209ENST00000604164 LDB2O43679 373 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 KIF5CO60282 957 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 POP7O75817 140 aaKnown RBP11.36□□□□□ -0.59
CCDC12-209ENST00000604164 APRTP07741 180 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 GSTM1P09488 218 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 ABCG1P45844 678 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 LIMK2P53671 638 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 UCNP55089 124 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 GSTM4Q03013 218 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 CACNG1Q06432 222 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 OLIG2Q13516 323 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 SEMA5AQ13591 1074 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 POU6F1Q14863 301 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 BCL7AQ4VC05 210 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 KHDC1Q4VXA5 237 aaKnown RBP11.36□□□□□ -0.59
CCDC12-209ENST00000604164 TMEM71Q6P5X7 295 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 ZNF449Q6P9G9 518 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 TMEM220Q6QAJ8 160 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 USP53Q70EK8 1073 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 B3GNT8Q7Z7M8 397 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 CLEC14AQ86T13 490 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 ZNF547Q8IVP9 402 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 NXPE1Q8N323 547 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 OR13C4Q8NGS5 318 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 PEX13Q92968 403 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 RDH14Q9HBH5 336 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 ASCL3Q9NQ33 180 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 EIF2B3Q9NR50 452 aaKnown RBP11.36□□□□□ -0.59
CCDC12-209ENST00000604164 SLC23A2Q9UGH3 650 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 ACSL5Q9ULC5 683 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 RIMKLBQ9ULI2 386 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 LOXL2Q9Y4K0 774 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 KCTD3Q9Y597 815 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 PCDHGA7Q9Y5G6 932 aa11.36□□□□□ -0.59
CCDC12-209ENST00000604164 GOLGA6L10A0A0M3HER8 536 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 MGAT4DA6NG13 374 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 MROH6A6NGR9 719 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 OR2AG2A6NM03 316 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 CDRT15L2A8MXV6 281 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 TLX3O43711 291 aaPredicted RBP11.35□□□□□ -0.59
CCDC12-209ENST00000604164 KRT37O76014 449 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 EML2O95834 649 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 ATP1B2P14415 290 aaPredicted RBP11.35□□□□□ -0.59
CCDC12-209ENST00000604164 TPH1P17752 444 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 ADRA1DP25100 572 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 MC4RP32245 332 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 CSTF2P33240 577 aaKnown RBP eCLIP11.35□□□□□ -0.59
CCDC12-209ENST00000604164 PPARGP37231 505 aaPredicted RBP11.35□□□□□ -0.59
CCDC12-209ENST00000604164 UBE2IP63279 158 aaKnown RBP11.35□□□□□ -0.59
CCDC12-209ENST00000604164 SARNPP82979 210 aaKnown RBP11.35□□□□□ -0.59
CCDC12-209ENST00000604164 TMPRSS15P98073 1019 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 XIAPP98170 497 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 CDK16Q00536 496 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 PTPRCAPQ14761 206 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 SIX1Q15475 284 aaPredicted RBP11.35□□□□□ -0.59
CCDC12-209ENST00000604164 ZRANB3Q5FWF4 1079 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 FNBP1LQ5T0N5 605 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 LYPLAL1Q5VWZ2 237 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 KLHL35Q6PF15 583 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 TAS2R42Q7RTR8 314 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 C11orf96Q7Z7L8 435 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 PLXDC1Q8IUK5 500 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 TAB3Q8N5C8 712 aaPredicted RBP11.35□□□□□ -0.59
CCDC12-209ENST00000604164 AGBL5Q8NDL9 886 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 OR52K1Q8NGK4 314 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 OR2L2Q8NH16 312 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 KCNE4Q8WWG9 221 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 DNAJC1Q96KC8 554 aaKnown RBP11.35□□□□□ -0.59
CCDC12-209ENST00000604164 LINC00615Q96LM1 132 aaPredicted RBP11.35□□□□□ -0.59
CCDC12-209ENST00000604164 RANBP9Q96S59 729 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 NUDT22Q9BRQ3 303 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 CCM2Q9BSQ5 444 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 SEMA6CQ9H3T2 930 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 ZDHHC3Q9NYG2 299 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.35□□□□□ -0.59
CCDC12-209ENST00000604164 TTC7AQ9ULT0 858 aaPredicted RBP11.35□□□□□ -0.59
CCDC12-209ENST00000604164 SCN8AQ9UQD0 1980 aa11.35□□□□□ -0.59
CCDC12-209ENST00000604164 FRYQ5TBA9 3013 aa11.34□□□□□ -0.59
CCDC12-209ENST00000604164 IGHV5-10-1A0A0J9YXX1 117 aa11.34□□□□□ -0.59
CCDC12-209ENST00000604164 C17orf113A0A1B0GUU1 675 aa11.34□□□□□ -0.59
CCDC12-209ENST00000604164 PRR19A6NJB7 356 aa11.34□□□□□ -0.59
CCDC12-209ENST00000604164 CES2O00748 559 aa11.34□□□□□ -0.59
CCDC12-209ENST00000604164 NVLO15381 856 aaKnown RBP11.34□□□□□ -0.59
CCDC12-209ENST00000604164 AP2A2O94973 939 aa11.34□□□□□ -0.59
CCDC12-209ENST00000604164 SLC35G4P0C7Q5 338 aa11.34□□□□□ -0.59
CCDC12-209ENST00000604164 AMD1P17707 334 aa11.34□□□□□ -0.59
CCDC12-209ENST00000604164 PSMA3P25788 255 aa11.34□□□□□ -0.59
CCDC12-209ENST00000604164 ACRV1P26436 265 aa11.34□□□□□ -0.59
CCDC12-209ENST00000604164 RPL10P27635 214 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms