RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 ARNT2Q9HBZ2 717 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 WDR70Q9NW82 654 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 SMOXQ9NWM0 555 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 ACSL6Q9UKU0 697 aa15.03■□□□□ -0
TRIM28-203ENST00000593582 PRAMEF33A0A0G2JMD5 474 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 PRR19A6NJB7 356 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 PRAMEF10O60809 474 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 SRP72O76094 671 aaKnown RBP15.02■□□□□ -0
TRIM28-203ENST00000593582 VIPP01282 170 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 CCDC175P0C221 793 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 MSH3P20585 1137 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 AKT1P31749 480 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 HADHAP40939 763 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 ETV5P41161 510 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 MAPK9P45984 424 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 UBE2IP63279 158 aaKnown RBP15.02■□□□□ -0
TRIM28-203ENST00000593582 CLN3Q13286 438 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 LONRF2Q1L5Z9 754 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 AGAP9Q5VTM2 703 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 DENND5AQ6IQ26 1287 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 ABRAXAS1Q6UWZ7 409 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 WASH2PQ6VEQ5 465 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 C11orf96Q7Z7L8 435 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 KLHDC8BQ8IXV7 354 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 RASGEF1AQ8N9B8 481 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 USP7Q93009 1102 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 ALS2CR12Q96Q35 445 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 FRMD8P1Q9BZ68 369 aaPredicted RBP15.02■□□□□ -0
TRIM28-203ENST00000593582 B3GNT4Q9C0J1 378 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 ASB8Q9H765 288 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 UCK1Q9HA47 277 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 CPNE5Q9HCH3 593 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 WASH6PQ9NQA3 447 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 TMEM9Q9P0T7 183 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 SCHIP1Q9P0W5 487 aaPredicted RBP15.02■□□□□ -0
TRIM28-203ENST00000593582 PDP2Q9P2J9 529 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 KCTD3Q9Y597 815 aa15.02■□□□□ -0
TRIM28-203ENST00000593582 DNMT3AQ9Y6K1 912 aaPredicted RBP15.02■□□□□ -0
TRIM28-203ENST00000593582 IGSF10Q6WRI0 2623 aa15.02□□□□□ -0.01
TRIM28-203ENST00000593582 SCN8AQ9UQD0 1980 aa15.02□□□□□ -0.01
TRIM28-203ENST00000593582 CACNA1GO43497 2377 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 TEX51A0A1B0GUA7 166 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 LILRA5A6NI73 299 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 OR2AG2A6NM03 316 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 PSMD3O43242 534 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 POP7O75817 140 aaKnown RBP15.01□□□□□ -0.01
TRIM28-203ENST00000593582 METTL18O95568 372 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 CCL4P13236 92 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 STIP1P31948 543 aaKnown RBP15.01□□□□□ -0.01
TRIM28-203ENST00000593582 HALP42357 657 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 DRG2P55039 364 aaKnown RBP15.01□□□□□ -0.01
TRIM28-203ENST00000593582 GDF10P55107 478 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 MSLNQ13421 630 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-203ENST00000593582 RPS6KA1Q15418 735 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 KCTD11Q693B1 232 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 TMEM220Q6QAJ8 160 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 TMEM26Q6ZUK4 368 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 ATG4AQ8WYN0 398 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 CXorf40BQ96DE9 158 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 UBL7Q96S82 380 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-203ENST00000593582 C19orf43Q9BQ61 176 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 TBC1D10AQ9BXI6 508 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 POT1Q9NUX5 634 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 ZNF624Q9P2J8 865 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-203ENST00000593582 FKBPLQ9UIM3 349 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 SSUH2Q9Y2M2 353 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 PCDHB11Q9Y5F2 797 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 ZFC3H1O60293 1989 aaKnown RBP15.01□□□□□ -0.01
TRIM28-203ENST00000593582 MGAQ8IWI9 3026 aa15.01□□□□□ -0.01
TRIM28-203ENST00000593582 OR52A4PA6NMU1 304 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 C9orf172C9J069 976 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 NRDCO43847 1150 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 AP2A1O95782 977 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 LIPCP11150 499 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 RALBP11234 206 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 FGF3P11487 239 aaPredicted RBP15□□□□□ -0.01
TRIM28-203ENST00000593582 BRAFP15056 766 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 CD82P27701 267 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 CA5AP35218 305 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 SLC19A1P41440 591 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 ZNF140P52738 457 aaPredicted RBP15□□□□□ -0.01
TRIM28-203ENST00000593582 CTSCP53634 463 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 TMPRSS15P98073 1019 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 VAC14Q08AM6 782 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 DMPKQ09013 629 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 SOWAHCQ53LP3 525 aaPredicted RBP15□□□□□ -0.01
TRIM28-203ENST00000593582 SNAP47Q5SQN1 464 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 FNBP1LQ5T0N5 605 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 ARHGAP40Q5TG30 622 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 FAM129CQ86XR2 697 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 SLC13A5Q86YT5 568 aaPredicted RBP15□□□□□ -0.01
TRIM28-203ENST00000593582 PLXDC1Q8IUK5 500 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 LRRC8AQ8IWT6 810 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 RBM12BQ8IXT5 1001 aaKnown RBP15□□□□□ -0.01
TRIM28-203ENST00000593582 OR13C4Q8NGS5 318 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 ULK4Q96C45 1275 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 DCUN1D1Q96GG9 259 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 TAAR9Q96RI9 348 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 CCNL2Q96S94 520 aaPredicted RBP15□□□□□ -0.01
TRIM28-203ENST00000593582 LZTFL1Q9NQ48 299 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms