RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ATP13A5Q4VNC0 1218 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 ZNF648Q5T619 568 aaPredicted RBP18.54■□□□□ 0.56
CCDC43-205ENST00000592333 KLHL35Q6PF15 583 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 SPOCD1Q6ZMY3 1216 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 TIPARPQ7Z3E1 657 aaKnown RBP18.54■□□□□ 0.56
CCDC43-205ENST00000592333 BPHLQ86WA6 291 aaPredicted RBP18.54■□□□□ 0.56
CCDC43-205ENST00000592333 KATNAL2Q8IYT4 538 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 KLHL6Q8WZ60 621 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 ZNF514Q96K75 400 aaPredicted RBP18.54■□□□□ 0.56
CCDC43-205ENST00000592333 CALR3Q96L12 384 aaKnown RBP18.54■□□□□ 0.56
CCDC43-205ENST00000592333 FCRL4Q96PJ5 515 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 CTRCQ99895 268 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 ARFGAP3Q9NP61 516 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 IL26Q9NPH9 171 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 SMOXQ9NWM0 555 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 IL17CQ9P0M4 197 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 SEMA5BQ9P283 1151 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 TMPRSS11EQ9UL52 423 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 SPO11Q9Y5K1 396 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 SLC30A1Q9Y6M5 507 aa18.54■□□□□ 0.56
CCDC43-205ENST00000592333 LOC101059948A0A1B0GTJ6 334 aa18.53■□□□□ 0.56
CCDC43-205ENST00000592333 AKR1B15C9JRZ8 316 aaPredicted RBP18.53■□□□□ 0.56
CCDC43-205ENST00000592333 AURKAO14965 403 aa18.53■□□□□ 0.56
CCDC43-205ENST00000592333 LCA5LO95447 670 aa18.53■□□□□ 0.56
CCDC43-205ENST00000592333 SPAM1P38567 509 aa18.53■□□□□ 0.56
CCDC43-205ENST00000592333 XRCC4Q13426 336 aa18.53■□□□□ 0.56
CCDC43-205ENST00000592333 SLC1A5Q15758 541 aa18.53■□□□□ 0.56
CCDC43-205ENST00000592333 AMZ2Q86W34 360 aa18.53■□□□□ 0.56
CCDC43-205ENST00000592333 TRAPPC5Q8IUR0 188 aa18.53■□□□□ 0.56
CCDC43-205ENST00000592333 TTC30BQ8N4P2 665 aa18.53■□□□□ 0.56
CCDC43-205ENST00000592333 DDHD1Q8NEL9 900 aa18.53■□□□□ 0.56
CCDC43-205ENST00000592333 GDAP1Q8TB36 358 aa18.53■□□□□ 0.56
CCDC43-205ENST00000592333 CXorf40BQ96DE9 158 aa18.53■□□□□ 0.56
CCDC43-205ENST00000592333 C19orf43Q9BQ61 176 aa18.53■□□□□ 0.56
CCDC43-205ENST00000592333 FERMT1Q9BQL6 677 aa18.53■□□□□ 0.56
CCDC43-205ENST00000592333 APMAPQ9HDC9 416 aa18.53■□□□□ 0.56
CCDC43-205ENST00000592333 KLHL3Q9UH77 587 aa18.53■□□□□ 0.56
CCDC43-205ENST00000592333 DNAJC16Q9Y2G8 782 aa18.53■□□□□ 0.56
CCDC43-205ENST00000592333 PKP3Q9Y446 797 aa18.53■□□□□ 0.56
CCDC43-205ENST00000592333 ALG6Q9Y672 507 aa18.53■□□□□ 0.56
CCDC43-205ENST00000592333 UBR5O95071 2799 aaPredicted RBP18.52■□□□□ 0.56
CCDC43-205ENST00000592333 SLC4A1P02730 911 aa18.52■□□□□ 0.56
CCDC43-205ENST00000592333 MT-ND3P03897 115 aa18.52■□□□□ 0.56
CCDC43-205ENST00000592333 FGF5P12034 268 aa18.52■□□□□ 0.56
CCDC43-205ENST00000592333 NFKB1P19838 968 aa18.52■□□□□ 0.56
CCDC43-205ENST00000592333 GFERP55789 205 aa18.52■□□□□ 0.56
CCDC43-205ENST00000592333 CDC20Q12834 499 aa18.52■□□□□ 0.56
CCDC43-205ENST00000592333 TBX2Q13207 712 aaPredicted RBP18.52■□□□□ 0.56
CCDC43-205ENST00000592333 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.52■□□□□ 0.56
CCDC43-205ENST00000592333 KHDC1Q4VXA5 237 aaKnown RBP18.52■□□□□ 0.56
CCDC43-205ENST00000592333 SIRPB2Q5JXA9 342 aa18.52■□□□□ 0.56
CCDC43-205ENST00000592333 PID1Q7Z2X4 250 aa18.52■□□□□ 0.56
CCDC43-205ENST00000592333 BEND7Q8N7W2 519 aaPredicted RBP18.52■□□□□ 0.56
CCDC43-205ENST00000592333 APOBEC4Q8WW27 367 aaKnown RBP18.52■□□□□ 0.56
CCDC43-205ENST00000592333 ZFPM2Q8WW38 1151 aa18.52■□□□□ 0.56
CCDC43-205ENST00000592333 UBXN4Q92575 508 aa18.52■□□□□ 0.56
CCDC43-205ENST00000592333 RBM41Q96IZ5 413 aaKnown RBP18.52■□□□□ 0.56
CCDC43-205ENST00000592333 MRGPRX2Q96LB1 330 aa18.52■□□□□ 0.56
CCDC43-205ENST00000592333 ULBP3Q9BZM4 244 aa18.52■□□□□ 0.56
CCDC43-205ENST00000592333 LUC7LQ9NQ29 371 aaKnown RBP18.52■□□□□ 0.56
CCDC43-205ENST00000592333 UBP1Q9NZI7 540 aa18.52■□□□□ 0.56
CCDC43-205ENST00000592333 KLHL8Q9P2G9 620 aaPredicted RBP18.52■□□□□ 0.56
CCDC43-205ENST00000592333 SAE1Q9UBE0 346 aaPredicted RBP18.52■□□□□ 0.56
CCDC43-205ENST00000592333 ANAPC2Q9UJX6 822 aa18.52■□□□□ 0.56
CCDC43-205ENST00000592333 EFR3BQ9Y2G0 817 aa18.52■□□□□ 0.56
CCDC43-205ENST00000592333 PCDHB3Q9Y5E6 796 aa18.52■□□□□ 0.56
CCDC43-205ENST00000592333 hCG_1818297A0A087WSY0 165 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 GLYATL1P3A0A0U1RQE8 302 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 MTX2O75431 263 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 ZNF189O75820 626 aaPredicted RBP18.51■□□□□ 0.55
CCDC43-205ENST00000592333 PYGMP11217 842 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 TYRP1P17643 537 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 TCN2P20062 427 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 RPL10P27635 214 aaKnown RBP18.51■□□□□ 0.55
CCDC43-205ENST00000592333 MAGEA1P43355 309 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 COPS2P61201 443 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 FOXM1Q08050 763 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 GPR18Q14330 331 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 PPP2R5EQ16537 467 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 C11orf63Q6NUN7 778 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 C6orf15Q6UXA7 325 aaPredicted RBP18.51■□□□□ 0.55
CCDC43-205ENST00000592333 GLT6D1Q7Z4J2 308 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 KMT5CQ86Y97 462 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 CCDC170Q8IYT3 715 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 ZNF567Q8N184 647 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 TGM7Q96PF1 710 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 QKIQ96PU8 341 aaKnown RBP eCLIP18.51■□□□□ 0.55
CCDC43-205ENST00000592333 TSPY26PQ9H489 355 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 BPIFA1Q9NP55 256 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 KCND3Q9UK17 655 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 KCTD3Q9Y597 815 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 RPS6KL1Q9Y6S9 549 aa18.51■□□□□ 0.55
CCDC43-205ENST00000592333 BSNQ9UPA5 3926 aa18.5■□□□□ 0.55
CCDC43-205ENST00000592333 APOC4-APOC2K7ER74 178 aa18.5■□□□□ 0.55
CCDC43-205ENST00000592333 NKX2-8O15522 239 aa18.5■□□□□ 0.55
CCDC43-205ENST00000592333 RASSF9O75901 435 aa18.5■□□□□ 0.55
CCDC43-205ENST00000592333 ANXA9O76027 345 aa18.5■□□□□ 0.55
CCDC43-205ENST00000592333 APOC2P02655 101 aa18.5■□□□□ 0.55
CCDC43-205ENST00000592333 TNNT1P13805 278 aa18.5■□□□□ 0.55
CCDC43-205ENST00000592333 PECAM1P16284 738 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms