RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 CACNG1Q06432 222 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 PLA2G4EQ3MJ16 856 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 PDE12Q6L8Q7 609 aaKnown RBP13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 SCAIQ8N9R8 606 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 OR2T34Q8NGX1 318 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 OR2T3Q8NH03 318 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 HM13Q8TCT9 377 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 STYXQ8WUJ0 223 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 ACAT2Q9BWD1 397 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 SLC17A7Q9P2U7 560 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 NADKO95544 446 aaPredicted RBP13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 PKMP14618 531 aaKnown RBP13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 FAM47BQ8NA70 645 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 SRFBP1Q8NEF9 429 aaKnown RBP13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 SIPA1Q96FS4 1042 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 ARHGAP39Q9C0H5 1083 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 SLC25A51Q9H1U9 297 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 ZNF780BQ9Y6R6 833 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 LYPLA1O75608 230 aaPredicted RBP13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 ERAL1O75616 437 aaKnown RBP13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 PIGRP01833 764 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 ADH5P11766 374 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 EPORP19235 508 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 RPIAP49247 311 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 SLC11A1P49279 550 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 HID1Q8IV36 788 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 TOR4AQ9NXH8 423 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 MRTO4Q9UKD2 239 aaKnown RBP13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 FFAR3O14843 346 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 TEX28O15482 410 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 GPR42O15529 346 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 TCF4P15884 667 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 CTBP1Q13363 440 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 ATP13A5Q4VNC0 1218 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 ADGRD1Q6QNK2 874 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 CPSF7Q8N684 471 aaKnown RBP13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 B3GALT6Q96L58 329 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 KLHL32Q96NJ5 620 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 PCDHB18PQ96TA0 734 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 IL23AQ9NPF7 189 aa13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 IFT80Q9P2H3 777 aaPredicted RBP13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 FCF1Q9Y324 198 aaKnown RBP13.2□□□□□ -0.3
SMARCA4-216ENST00000591545 TRBV23OR9-2A0A075B6M9 112 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 A0A0J9YYE9 177 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 H3BNH8 94 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 PAPSS1O43252 624 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 MFSD11O43934 449 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 OR10H3O60404 316 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 SOD2P04179 222 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 SLC6A2P23975 617 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 MAT2AP31153 395 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 NID2Q14112 1375 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 DLG2Q15700 870 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 QPCTQ16769 361 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 C5orf22Q49AR2 442 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 MCFD2Q8NI22 146 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 RBM4BQ9BQ04 359 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 RBM4Q9BWF3 364 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 IRAK3Q9Y616 596 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 CHRNGP07510 517 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 RHAGQ02094 409 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 SLC25A24Q6NUK1 477 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 RHBDF2Q6PJF5 856 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 AKAP14Q86UN6 197 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 TMEM139Q8IV31 216 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 TTC29Q8NA56 475 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 TEPSINQ96N21 525 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 RSPH9Q9H1X1 276 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 MATN3O15232 486 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 MTRF1O75570 445 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 HNRNPLP14866 589 aaKnown RBP eCLIP13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 TIE1P35590 1138 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 SSR2P43308 183 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 HNRNPDQ14103 355 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 LPIN1Q14693 890 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 TAPT1Q6NXT6 567 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 THAP5Q7Z6K1 395 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 NMUR1Q9HB89 426 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 PCDH12Q9NPG4 1184 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 CDH22Q9UJ99 828 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 GPIP06744 558 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 LINC00032P0C843 101 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 CMPK1P30085 196 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 NETO2Q8NC67 525 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 GPR156Q8NFN8 814 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 CNTN3Q9P232 1028 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 TRPS1Q9UHF7 1281 aa13.19□□□□□ -0.3
SMARCA4-216ENST00000591545 IPO13O94829 963 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 C2P06681 752 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 FAUP35544 74 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 SOWAHAQ2M3V2 549 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 GPAT3Q53EU6 434 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 XKR4Q5GH76 650 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 RPL10LQ96L21 214 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 NMUR2Q9GZQ4 415 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 TDP1Q9NUW8 608 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 TLR6Q9Y2C9 796 aa13.18□□□□□ -0.3
SMARCA4-216ENST00000591545 CHURC1-FNTBB4DL54 471 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms