RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 PRSS21Q9Y6M0 314 aa18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 V9GYY5 206 aaPredicted RBP18.71■□□□□ 0.59
CLPTM1-209ENST00000588855 ARHGEF17Q96PE2 2063 aaPredicted RBP18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 KMOO15229 486 aa18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 GIMD1P0DJR0 217 aa18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 ERVK-10P10266 1014 aa18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 OGNP20774 298 aaKnown RBP18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 AK4P27144 223 aaPredicted RBP18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 NSG1P42857 185 aa18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 SLC1A2P43004 574 aa18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 TTPAP49638 278 aa18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 CTBSQ01459 385 aa18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 SLC14A1Q13336 389 aa18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 C11orf96Q7Z7L8 435 aa18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 NRROSQ86YC3 692 aa18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 CILP2Q8IUL8 1156 aa18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 DENND6AQ8IWF6 608 aa18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 BEND7Q8N7W2 519 aaPredicted RBP18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 GSDMBQ8TAX9 411 aa18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 GPBAR1Q8TDU6 330 aa18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 TTC1Q99614 292 aa18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 RRAGDQ9NQL2 400 aaPredicted RBP18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 IARS2Q9NSE4 1012 aaKnown RBP18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 SLC23A2Q9UGH3 650 aa18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 BTBD3Q9Y2F9 522 aa18.7■□□□□ 0.58
CLPTM1-209ENST00000588855 PMLP29590 882 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 SSTR1P30872 391 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 ILF3Q12906 894 aaKnown RBP eCLIP18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 DEFB133Q30KQ1 61 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 BCL7AQ4VC05 210 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 DBX2Q6ZNG2 339 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 SDCCAG8Q86SQ7 713 aaPredicted RBP18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 PALM2Q8IXS6 379 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 GSPT2Q8IYD1 628 aaKnown RBP18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 NETO1Q8TDF5 533 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 FAM167BQ9BTA0 163 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 SLC17A6Q9P2U8 582 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 GPR34Q9UPC5 381 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 KCNK6Q9Y257 313 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 CSNK1G3Q9Y6M4 447 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 LMO7DNF2Z398 122 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 YY2O15391 372 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 NDUFS3O75489 264 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 PBLDP30039 288 aaPredicted RBP18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 PPARGP37231 505 aaPredicted RBP18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 PRLHRP49683 370 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 GPX6P59796 221 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 CTBP1Q13363 440 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 LRP8Q14114 963 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 FRG1Q14331 258 aaKnown RBP18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 SUZ12Q15022 739 aaKnown RBP18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 INSCQ1MX18 579 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 SLC30A9Q6PML9 568 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 TAF8Q7Z7C8 310 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 GKN2Q86XP6 184 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 LMNTD2Q8IXW0 634 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 CALML6Q8TD86 181 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 ZNF514Q96K75 400 aaPredicted RBP18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 TIMM29Q9BSF4 260 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 GSDMCQ9BYG8 508 aa18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 PPANQ9NQ55 473 aaKnown RBP18.69■□□□□ 0.58
CLPTM1-209ENST00000588855 NEMP2A6NFY4 417 aa18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 FLRT2O43155 660 aa18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 ANXA6P08133 673 aa18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 MYBL2P10244 700 aa18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 ZNF7P17097 686 aaPredicted RBP18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 ACTR1BP42025 376 aa18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 ACTR1AP61163 376 aa18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 ARHGAP8P85298 464 aa18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 MPP1Q00013 466 aa18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 ZNF789Q5FWF6 425 aa18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 NAXDQ8IW45 347 aa18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 EID2Q8N6I1 236 aa18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 LPGAT1Q92604 370 aa18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 TCF12Q99081 682 aa18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 P2RY12Q9H244 342 aa18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 FBXO6Q9NRD1 293 aaPredicted RBP18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 KLC4Q9NSK0 619 aa18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 MOCS1Q9NZB8 636 aa18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 FBXO5Q9UKT4 447 aa18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 DOLKQ9UPQ8 538 aa18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 DNAJC16Q9Y2G8 782 aa18.68■□□□□ 0.58
CLPTM1-209ENST00000588855 UBA6A0AVT1 1052 aaPredicted RBP18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 TRIM38O00635 465 aa18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 PRMT5O14744 637 aaPredicted RBP18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 SH3BP5O60239 455 aa18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 POP7O75817 140 aaKnown RBP18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 AP2A2O94973 939 aa18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 GRK6P43250 576 aa18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 TUBB4BP68371 445 aa18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 UBAP2Q5T6F2 1119 aaKnown RBP18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 TEDDM1Q5T9Z0 273 aa18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 RNF187Q5TA31 235 aaPredicted RBP18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 CEP128Q6ZU80 1094 aa18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 CNTN4Q8IWV2 1026 aa18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 OR4C6Q8NH72 309 aa18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 SETD7Q8WTS6 366 aaKnown RBP18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 CAMK1GQ96NX5 476 aa18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 TSPYL1Q9H0U9 437 aa18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 LRRC4CQ9HCJ2 640 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms