RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 RASGRP3Q8IV61 690 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 APLFQ8IW19 511 aaPredicted RBP18.08■□□□□ 0.48
CCDC43-204ENST00000588687 RBM12BQ8IXT5 1001 aaKnown RBP18.08■□□□□ 0.48
CCDC43-204ENST00000588687 TRIM55Q9BYV6 548 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 AKIRIN1Q9H9L7 192 aaPredicted RBP18.08■□□□□ 0.48
CCDC43-204ENST00000588687 LHX9Q9NQ69 397 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 RAD18Q9NS91 495 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 UVRAGQ9P2Y5 699 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 KCND3Q9UK17 655 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 TLK1Q9UKI8 766 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 CAPN11Q9UMQ6 739 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 PCDHB3Q9Y5E6 796 aa18.08■□□□□ 0.48
CCDC43-204ENST00000588687 MYO9AB2RTY4 2548 aa18.07■□□□□ 0.48
CCDC43-204ENST00000588687 IGHV5-51A0A0C4DH38 117 aa18.07■□□□□ 0.48
CCDC43-204ENST00000588687 DNAJB5O75953 348 aa18.07■□□□□ 0.48
CCDC43-204ENST00000588687 SERPINC1P01008 464 aa18.07■□□□□ 0.48
CCDC43-204ENST00000588687 CDK18Q07002 472 aa18.07■□□□□ 0.48
CCDC43-204ENST00000588687 ATP13A5Q4VNC0 1218 aa18.07■□□□□ 0.48
CCDC43-204ENST00000588687 CACHD1Q5VU97 1274 aa18.07■□□□□ 0.48
CCDC43-204ENST00000588687 ASB18Q6ZVZ8 466 aa18.07■□□□□ 0.48
CCDC43-204ENST00000588687 PPP1R3BQ86XI6 285 aa18.07■□□□□ 0.48
CCDC43-204ENST00000588687 VSIG1Q86XK7 387 aa18.07■□□□□ 0.48
CCDC43-204ENST00000588687 SPATA22Q8NHS9 363 aa18.07■□□□□ 0.48
CCDC43-204ENST00000588687 ZNF830Q96NB3 372 aaPredicted RBP18.07■□□□□ 0.48
CCDC43-204ENST00000588687 SLC25A51Q9H1U9 297 aa18.07■□□□□ 0.48
CCDC43-204ENST00000588687 CTTNBP2NLQ9P2B4 639 aa18.07■□□□□ 0.48
CCDC43-204ENST00000588687 ITPR2Q14571 2701 aa18.07■□□□□ 0.48
CCDC43-204ENST00000588687 MED13Q9UHV7 2174 aa18.07■□□□□ 0.48
CCDC43-204ENST00000588687 BLACEA4D250 179 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 CDC14CA4D256 554 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 C21orf140B9A014 251 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 KATNA1O75449 491 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 CDK14O94921 469 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 MT-CYBP00156 380 aaPredicted RBP18.06■□□□□ 0.48
CCDC43-204ENST00000588687 FOLR1P15328 257 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 CA5AP35218 305 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 NOP2P46087 812 aaKnown RBP18.06■□□□□ 0.48
CCDC43-204ENST00000588687 UQCRFS1P47985 274 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 DMPKQ09013 629 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 PCSK7Q16549 785 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 PWWP2BQ6NUJ5 590 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 IRGCQ6NXR0 463 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 NT5DC3Q86UY8 548 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 ZDHHC12Q96GR4 267 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 AGAP3Q96P47 875 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 GPR63Q9BZJ6 419 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 ACTL8Q9H568 366 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 PADI1Q9ULC6 663 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 HEY1Q9Y5J3 304 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 CENPEQ02224 2701 aa18.06■□□□□ 0.48
CCDC43-204ENST00000588687 GOLGA6L22H0YM25 854 aa18.05■□□□□ 0.48
CCDC43-204ENST00000588687 GPR39O43194 453 aa18.05■□□□□ 0.48
CCDC43-204ENST00000588687 NDST3O95803 873 aa18.05■□□□□ 0.48
CCDC43-204ENST00000588687 IDSP22304 550 aa18.05■□□□□ 0.48
CCDC43-204ENST00000588687 FECHP22830 423 aa18.05■□□□□ 0.48
CCDC43-204ENST00000588687 HNRNPH3P31942 346 aaKnown RBP18.05■□□□□ 0.48
CCDC43-204ENST00000588687 FANCCQ00597 558 aa18.05■□□□□ 0.48
CCDC43-204ENST00000588687 TUBB3Q13509 450 aa18.05■□□□□ 0.48
CCDC43-204ENST00000588687 SEMA5AQ13591 1074 aa18.05■□□□□ 0.48
CCDC43-204ENST00000588687 KCNAB1Q14722 419 aa18.05■□□□□ 0.48
CCDC43-204ENST00000588687 NOMO1Q15155 1222 aa18.05■□□□□ 0.48
CCDC43-204ENST00000588687 NFKBIBQ15653 356 aa18.05■□□□□ 0.48
CCDC43-204ENST00000588687 ASTE1Q2TB18 679 aaPredicted RBP18.05■□□□□ 0.48
CCDC43-204ENST00000588687 CPZQ66K79 652 aa18.05■□□□□ 0.48
CCDC43-204ENST00000588687 NPNTQ6UXI9 565 aa18.05■□□□□ 0.48
CCDC43-204ENST00000588687 CERS6Q6ZMG9 384 aa18.05■□□□□ 0.48
CCDC43-204ENST00000588687 FAM83HQ6ZRV2 1179 aaPredicted RBP18.05■□□□□ 0.48
CCDC43-204ENST00000588687 TRAPPC5Q8IUR0 188 aa18.05■□□□□ 0.48
CCDC43-204ENST00000588687 TTC30BQ8N4P2 665 aa18.05■□□□□ 0.48
CCDC43-204ENST00000588687 TEX19Q8NA77 164 aa18.05■□□□□ 0.48
CCDC43-204ENST00000588687 CXorf40BQ96DE9 158 aa18.05■□□□□ 0.48
CCDC43-204ENST00000588687 TWSG1Q9GZX9 223 aa18.05■□□□□ 0.48
CCDC43-204ENST00000588687 HIVEP3Q5T1R4 2406 aa18.04■□□□□ 0.48
CCDC43-204ENST00000588687 DOPEY1Q5JWR5 2465 aa18.04■□□□□ 0.48
CCDC43-204ENST00000588687 LRRD1A4D1F6 860 aa18.04■□□□□ 0.48
CCDC43-204ENST00000588687 GAPDHSO14556 408 aaPredicted RBP18.04■□□□□ 0.48
CCDC43-204ENST00000588687 MT-ND3P03897 115 aa18.04■□□□□ 0.48
CCDC43-204ENST00000588687 HMGCLP35914 325 aa18.04■□□□□ 0.48
CCDC43-204ENST00000588687 CTSCP53634 463 aa18.04■□□□□ 0.48
CCDC43-204ENST00000588687 RPS18P62269 152 aaKnown RBP18.04■□□□□ 0.48
CCDC43-204ENST00000588687 AP1B1Q10567 949 aa18.04■□□□□ 0.48
CCDC43-204ENST00000588687 TMEM115Q12893 351 aaPredicted RBP18.04■□□□□ 0.48
CCDC43-204ENST00000588687 IL10RAQ13651 578 aa18.04■□□□□ 0.48
CCDC43-204ENST00000588687 CAPRIN2Q6IMN6 1127 aaKnown RBP18.04■□□□□ 0.48
CCDC43-204ENST00000588687 ZNF517Q6ZMY9 492 aaPredicted RBP18.04■□□□□ 0.48
CCDC43-204ENST00000588687 ATCAYQ86WG3 371 aa18.04■□□□□ 0.48
CCDC43-204ENST00000588687 DTX3LQ8TDB6 740 aa18.04■□□□□ 0.48
CCDC43-204ENST00000588687 UBXN4Q92575 508 aa18.04■□□□□ 0.48
CCDC43-204ENST00000588687 FCRL4Q96PJ5 515 aa18.04■□□□□ 0.48
CCDC43-204ENST00000588687 BPIFA1Q9NP55 256 aa18.04■□□□□ 0.48
CCDC43-204ENST00000588687 MLXIPLQ9NP71 852 aa18.04■□□□□ 0.48
CCDC43-204ENST00000588687 IL26Q9NPH9 171 aa18.04■□□□□ 0.48
CCDC43-204ENST00000588687 TRIM10Q9UDY6 481 aa18.04■□□□□ 0.48
CCDC43-204ENST00000588687 CRYBG3Q68DQ2 2970 aa18.04■□□□□ 0.48
CCDC43-204ENST00000588687 PCSK5Q92824 1860 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 PIPSLA2A3N6 862 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 H2AFZP0C0S5 128 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 EBLN1P0CF75 366 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 CASP14P31944 242 aa18.03■□□□□ 0.48
CCDC43-204ENST00000588687 CD68P34810 354 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms