RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 SDE2Q6IQ49 451 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 TXNDC11Q6PKC3 985 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 MAMSTRQ6ZN01 415 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 CLNKQ7Z7G1 428 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 TSPAN33Q86UF1 283 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 PIANPQ8IYJ0 282 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 ARHGAP24Q8N264 748 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 NXPE1Q8N323 547 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 ZNF781Q8N8C0 355 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 PNPLA1Q8N8W4 532 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 KDM1BQ8NB78 822 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 SIDT2Q8NBJ9 832 aaKnown RBP9.19□□□□□ -0.94
SS18-220ENST00000582092 ANKRD49Q8WVL7 239 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 KIAA1191Q96A73 305 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 ECHDC3Q96DC8 303 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 LINGO1Q96FE5 620 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 GPR78Q96P69 363 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 PLEKHG4BQ96PX9 1271 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 TRIM54Q9BYV2 358 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 SHCBP1LQ9BZQ2 653 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 RASSF4Q9H2L5 321 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 FAM83DQ9H4H8 585 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 KCNK13Q9HB14 408 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 IL26Q9NPH9 171 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 SPATS2LQ9NUQ6 558 aaKnown RBP9.19□□□□□ -0.94
SS18-220ENST00000582092 MRGBPQ9NV56 204 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 FAM86C1Q9NVL1 165 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 ZDHHC3Q9NYG2 299 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 DKK3Q9UBP4 350 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 B4GALT6Q9UBX8 382 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 HAO1Q9UJM8 370 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 SLC12A4Q9UP95 1085 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 CDYLQ9Y232 598 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 DHRS7Q9Y394 339 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 FIS1Q9Y3D6 152 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 MTF2Q9Y483 593 aaPredicted RBP9.19□□□□□ -0.94
SS18-220ENST00000582092 OAS3Q9Y6K5 1087 aaKnown RBP9.19□□□□□ -0.94
SS18-220ENST00000582092 PIEZO1Q92508 2521 aa9.19□□□□□ -0.94
SS18-220ENST00000582092 A0A0U1RQS6 177 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 C16orf96A6NNT2 1141 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 A8MT66 165 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 QSOX1O00391 747 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 TRIM24O15164 1050 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 RAD51BO15315 384 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 GYG2O15488 501 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 LZTS3O60299 673 aaPredicted RBP9.18□□□□□ -0.94
SS18-220ENST00000582092 GFRA3O60609 400 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 KERAO60938 352 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 NIPSNAP2O75323 286 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 UNC5CO95185 931 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 SLC25A14O95258 325 aaPredicted RBP9.18□□□□□ -0.94
SS18-220ENST00000582092 CHEK2O96017 543 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 ELFN1P0C7U0 828 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 SP9P0CG40 484 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 TIMP2P16035 220 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 ITGB6P18564 788 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 DRD1P21728 446 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 CALB2P22676 271 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 MPSTP25325 297 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 ARL1P40616 181 aaPredicted RBP9.18□□□□□ -0.94
SS18-220ENST00000582092 CXCL12P48061 93 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 SPINT3P49223 89 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 IDH3AP50213 366 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 HERVK_113P63132 956 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 SEMG2Q02383 582 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 PTSQ03393 145 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 CSTF1Q05048 431 aaKnown RBP9.18□□□□□ -0.94
SS18-220ENST00000582092 KRT72Q14CN4 511 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 PON2Q15165 354 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 CRY1Q16526 586 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 PFKFB4Q16877 469 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 POM121L1PQ3SYA9 428 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 METTL21CQ5VZV1 264 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 TMEM215Q68D42 235 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 ANKS6Q68DC2 871 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 NAPRTQ6XQN6 538 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 ADAMTSL2Q86TH1 951 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 ISCA2Q86U28 154 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 SPEM1Q8N4L4 309 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 ZBTB2Q8N680 514 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 PTGR2Q8N8N7 351 aaPredicted RBP9.18□□□□□ -0.94
SS18-220ENST00000582092 TXNDC5Q8NBS9 432 aaKnown RBP9.18□□□□□ -0.94
SS18-220ENST00000582092 GPR26Q8NDV2 337 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 TMIEQ8NEW7 156 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 SKA2Q8WVK7 121 aaPredicted RBP9.18□□□□□ -0.94
SS18-220ENST00000582092 ATP6V1E2Q96A05 226 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 MCUR1Q96AQ8 359 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 MRGPRX3Q96LB0 322 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 LRRC3BQ96PB8 259 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 MCCC1Q96RQ3 725 aaPredicted RBP9.18□□□□□ -0.94
SS18-220ENST00000582092 SORT1Q99523 831 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 ERVK-6Q9BXR3 956 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 C20orf27Q9GZN8 174 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 COG4Q9H9E3 785 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 PCDH12Q9NPG4 1184 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 TCF7L2Q9NQB0 619 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 ZSCAN32Q9NX65 697 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 KCTD5Q9NXV2 234 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 STK38LQ9Y2H1 464 aa9.18□□□□□ -0.94
SS18-220ENST00000582092 ANGPTL3Q9Y5C1 460 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms