RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 ZFAND4Q86XD8 727 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 ABI1Q8IZP0 508 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 SLC43A3Q8NBI5 491 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 ADAMTS16Q8TE57 1224 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 OVCA2Q8WZ82 227 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 ESAMQ96AP7 390 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 ISG20Q96AZ6 181 aaKnown RBP8.85□□□□□ -0.99
NCBP3-204ENST00000574911 C1orf50Q9BV19 199 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 NANOGQ9H9S0 305 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 BPIFA1Q9NP55 256 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 DDX18Q9NVP1 670 aaKnown RBP8.85□□□□□ -0.99
NCBP3-204ENST00000574911 CD274Q9NZQ7 290 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 SLAMF8Q9P0V8 285 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 HSFX1Q9UBD0 423 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 PCDHB7Q9Y5E2 793 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 KANSL1LA0AUZ9 987 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 ZNF840PA6NDX5 716 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 CBX4O00257 560 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 STX7O15400 261 aaKnown RBP8.84□□□□□ -0.99
NCBP3-204ENST00000574911 COCHO43405 550 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 SYNCRIPO60506 623 aaKnown RBP8.84□□□□□ -0.99
NCBP3-204ENST00000574911 TPST1O60507 370 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 TRMUO75648 421 aaKnown RBP8.84□□□□□ -0.99
NCBP3-204ENST00000574911 ESR1P03372 595 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 GNAO1P09471 354 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 NCK1P16333 377 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 HRH2P25021 359 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 HTR1EP28566 365 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 CDH15P55291 814 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 ARF5P84085 180 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 TGFBIQ15582 683 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 FUT11Q495W5 492 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 AARS2Q5JTZ9 985 aaKnown RBP8.84□□□□□ -0.99
NCBP3-204ENST00000574911 HECTD3Q5T447 861 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 RNF219Q5W0B1 726 aaPredicted RBP8.84□□□□□ -0.99
NCBP3-204ENST00000574911 PRSS55Q6UWB4 352 aaPredicted RBP8.84□□□□□ -0.99
NCBP3-204ENST00000574911 ANKS3Q6ZW76 656 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 PROSER1Q86XN7 944 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 SFRP1Q8N474 314 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 DPP10Q8N608 796 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 EFHBQ8N7U6 833 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 PDZD8Q8NEN9 1154 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 TNIP2Q8NFZ5 429 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 OR52B6Q8NGF0 335 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 PROKR1Q8TCW9 393 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 PDLIM5Q96HC4 596 aaKnown RBP8.84□□□□□ -0.99
NCBP3-204ENST00000574911 CEP295NLQ96MC4 621 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 GLT1D1Q96MS3 346 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 TMEM74Q96NL1 305 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 ZIC5Q96T25 663 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 MUC3BQ9H195 1237 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 TIMMDC1Q9NPL8 285 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 HEBP1Q9NRV9 189 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 ANAPC2Q9UJX6 822 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 PTBP2Q9UKA9 531 aaKnown RBP8.84□□□□□ -0.99
NCBP3-204ENST00000574911 OAZ3Q9UMX2 235 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 A0A087WXM4 84 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 A0A1B0GVM2 712 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 NT5C1B-RDH14C9J2C7 533 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 ADAM12O43184 909 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 STC2O76061 302 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 GALTP07902 379 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 ENO2P09104 434 aaPredicted RBP8.84□□□□□ -0.99
NCBP3-204ENST00000574911 CORO1AP31146 461 aaKnown RBP8.84□□□□□ -0.99
NCBP3-204ENST00000574911 ELAVL2Q12926 359 aaKnown RBP8.84□□□□□ -0.99
NCBP3-204ENST00000574911 PCBP2Q15366 365 aaKnown RBP eCLIP8.84□□□□□ -0.99
NCBP3-204ENST00000574911 AASDHQ4L235 1098 aaPredicted RBP8.84□□□□□ -0.99
NCBP3-204ENST00000574911 TIGD2Q4W5G0 525 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 CXorf57Q6NSI4 855 aaKnown RBP8.84□□□□□ -0.99
NCBP3-204ENST00000574911 LETMD1Q6P1Q0 360 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 IFNEQ86WN2 208 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 TMEM173Q86WV6 379 aaPredicted RBP8.84□□□□□ -0.99
NCBP3-204ENST00000574911 ERI1Q8IV48 349 aaKnown RBP8.84□□□□□ -0.99
NCBP3-204ENST00000574911 TBC1D21Q8IYX1 336 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 CDYL2Q8N8U2 506 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 FNDC5Q8NAU1 212 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 BCL7CQ8WUZ0 217 aaPredicted RBP8.84□□□□□ -0.99
NCBP3-204ENST00000574911 BIRC7Q96CA5 298 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 TTPALQ9BTX7 342 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 NACA2Q9H009 215 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 INTS7Q9NVH2 962 aaKnown RBP8.84□□□□□ -0.99
NCBP3-204ENST00000574911 LHX3Q9UBR4 397 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 ZNF639Q9UID6 485 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 USP22Q9UPT9 525 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 DHRS7Q9Y394 339 aa8.84□□□□□ -0.99
NCBP3-204ENST00000574911 RNF103-CHMP3A0A140T963 221 aa8.83□□□□□ -1
NCBP3-204ENST00000574911 DYTNA2CJ06 578 aa8.83□□□□□ -1
NCBP3-204ENST00000574911 E5RI56 91 aa8.83□□□□□ -1
NCBP3-204ENST00000574911 GIPC1O14908 333 aa8.83□□□□□ -1
NCBP3-204ENST00000574911 FZD6O60353 706 aa8.83□□□□□ -1
NCBP3-204ENST00000574911 TSPAN3O60637 253 aa8.83□□□□□ -1
NCBP3-204ENST00000574911 RPL10P27635 214 aaKnown RBP8.83□□□□□ -1
NCBP3-204ENST00000574911 GPNMBQ14956 572 aa8.83□□□□□ -1
NCBP3-204ENST00000574911 ATP6AP1LQ52LC2 224 aa8.83□□□□□ -1
NCBP3-204ENST00000574911 TTC33Q6PID6 262 aaPredicted RBP8.83□□□□□ -1
NCBP3-204ENST00000574911 SLC2A7Q6PXP3 512 aa8.83□□□□□ -1
NCBP3-204ENST00000574911 PRR23BQ6ZRT6 265 aa8.83□□□□□ -1
NCBP3-204ENST00000574911 LRRC8DQ7L1W4 858 aa8.83□□□□□ -1
NCBP3-204ENST00000574911 LPCAT2Q7L5N7 544 aa8.83□□□□□ -1
NCBP3-204ENST00000574911 HID1Q8IV36 788 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms