RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 TRAPPC5Q8IUR0 188 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 PPIL6Q8IXY8 311 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 ARL14Q8N4G2 192 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 CLDN19Q8N6F1 224 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 ARL10Q8N8L6 244 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 NOA1Q8NC60 698 aaKnown RBP6.88□□□□□ -1.31
SMG6-209ENST00000571442 PPHLN1Q8NEY8 458 aaKnown RBP6.88□□□□□ -1.31
SMG6-209ENST00000571442 IFI44Q8TCB0 444 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 ZDHHC1Q8WTX9 485 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 ADAMTS14Q8WXS8 1223 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 CCDC74AQ96AQ1 378 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 NRTNQ99748 197 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 C19orf43Q9BQ61 176 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 DUSP23Q9BVJ7 150 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 GSDMCQ9BYG8 508 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 DPH5Q9H2P9 285 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 DPEP2Q9H4A9 486 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 RMI1Q9H9A7 625 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 MRM3Q9HC36 420 aaKnown RBP6.88□□□□□ -1.31
SMG6-209ENST00000571442 PRDM8Q9NQV8 689 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 KLC4Q9NSK0 619 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 ZDHHC3Q9NYG2 299 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 GRHL1Q9NZI5 618 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 RNF14Q9UBS8 474 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 CRLS1Q9UJA2 301 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 APPL1Q9UKG1 709 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 RIMKLBQ9ULI2 386 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 DOLKQ9UPQ8 538 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 MRFAP1Q9Y605 127 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 SLC30A1Q9Y6M5 507 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 RNF215Q9Y6U7 377 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 PKD1L2Q7Z442 2459 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 UNC13CQ8NB66 2214 aa6.88□□□□□ -1.31
SMG6-209ENST00000571442 ANKRD11Q6UB99 2663 aaPredicted RBP6.87□□□□□ -1.31
SMG6-209ENST00000571442 ASPMQ8IZT6 3477 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 ATRXP46100 2492 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 A0A1W2PQM1 296 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 IQCF5A8MTL0 148 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 EFCAB8A8MWE9 144 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 BHMG1C9JSJ3 638 aaPredicted RBP6.87□□□□□ -1.31
SMG6-209ENST00000571442 KMOO15229 486 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 B4GAT1O43505 415 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 SNX2O60749 519 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 RFPL3O75679 317 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 POP7O75817 140 aaKnown RBP6.87□□□□□ -1.31
SMG6-209ENST00000571442 ALPPL2P10696 532 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 MLNP12872 115 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 MSH3P20585 1137 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 RPL10P27635 214 aaKnown RBP6.87□□□□□ -1.31
SMG6-209ENST00000571442 AKT1P31749 480 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 PRLHRP49683 370 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 PDX1P52945 283 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 DRG2P55039 364 aaKnown RBP6.87□□□□□ -1.31
SMG6-209ENST00000571442 CCL7P80098 99 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 PDE1BQ01064 536 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 SLC7A5Q01650 507 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 ILF3Q12906 894 aaKnown RBP eCLIP6.87□□□□□ -1.317e-7■■■■□ 23.2
SMG6-209ENST00000571442 DHX34Q14147 1143 aaKnown RBP6.87□□□□□ -1.31
SMG6-209ENST00000571442 FASTKD3Q14CZ7 662 aaKnown RBP6.87□□□□□ -1.31
SMG6-209ENST00000571442 SEPT7Q16181 437 aaKnown RBP6.87□□□□□ -1.31
SMG6-209ENST00000571442 INSCQ1MX18 579 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 SKIDA1Q1XH10 827 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 ANKRD20A4Q4UJ75 823 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 BCL7AQ4VC05 210 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 C14orf28Q4W4Y0 310 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 DUPD1Q68J44 220 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 DUS1LQ6P1R4 473 aaKnown RBP6.87□□□□□ -1.31
SMG6-209ENST00000571442 AFTPHQ6ULP2 937 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 ZDHHC24Q6UX98 284 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 TAS2R42Q7RTR8 314 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 LRRTM4Q86VH4 590 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 SDR16C5Q8N3Y7 309 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 SPDYE1Q8NFV5 336 aaPredicted RBP6.87□□□□□ -1.31
SMG6-209ENST00000571442 OR6P1Q8NGX9 317 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 OR4L1Q8NH43 312 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 SLC37A2Q8TED4 501 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 ZNF669Q96BR6 464 aaPredicted RBP6.87□□□□□ -1.31
SMG6-209ENST00000571442 LRRC45Q96CN5 670 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 TRIM44Q96DX7 344 aaPredicted RBP6.87□□□□□ -1.31
SMG6-209ENST00000571442 LRRC1Q9BTT6 524 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 SCNM1Q9BWG6 230 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 TMEM121BQ9BXQ6 578 aaPredicted RBP6.87□□□□□ -1.31
SMG6-209ENST00000571442 IL22Q9GZX6 179 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 OSGEPL1Q9H4B0 414 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 BFARQ9NZS9 450 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 ZNF624Q9P2J8 865 aaPredicted RBP6.87□□□□□ -1.31
SMG6-209ENST00000571442 SLC17A6Q9P2U8 582 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 FAM8A1Q9UBU6 413 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 ATXN7L1Q9ULK2 861 aaPredicted RBP6.87□□□□□ -1.31
SMG6-209ENST00000571442 PADI4Q9UM07 663 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 WDFY3Q8IZQ1 3526 aa6.87□□□□□ -1.31
SMG6-209ENST00000571442 ACACAQ13085 2346 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 FAM237BA0A1B0GVD1 139 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 A0A1W2PNU3 283 aaPredicted RBP6.86□□□□□ -1.31
SMG6-209ENST00000571442 ESYT3A0FGR9 886 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 PMS2P1A4D2B8 440 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 FAM187AA6NFU0 413 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 SDR42E2A6NKP2 422 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 OR52A4PA6NMU1 304 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 GPR89AB7ZAQ6 455 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms