RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 KIAA2013Q8IYS2 634 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 SLC25A45Q8N413 288 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 FSTL5Q8N475 847 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-224ENST00000568877 CLDN19Q8N6F1 224 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 GPBAR1Q8TDU6 330 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 NAT14Q8WUY8 206 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 CLPBQ9H078 707 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 UCKL1Q9NWZ5 548 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 PLEKHM1Q9Y4G2 1056 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 CSNK1G3Q9Y6M4 447 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 RALGAPA1Q6GYQ0 2036 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 CACNA1EQ15878 2313 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 PLXNB3Q9ULL4 1909 aa16.51■□□□□ 0.23
COMMD4-224ENST00000568877 ZFHX2Q9C0A1 2572 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-224ENST00000568877 NEMP2A6NFY4 417 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 SPAG6O75602 509 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 POP7O75817 140 aaKnown RBP16.5■□□□□ 0.23
COMMD4-224ENST00000568877 S1PR4O95977 384 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 CELA2BP08218 269 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-224ENST00000568877 MYBL2P10244 700 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 PLA2G5P39877 138 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 SLC1A2P43004 574 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 CTBSQ01459 385 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 ILF3Q12906 894 aaKnown RBP eCLIP16.5■□□□□ 0.23
COMMD4-224ENST00000568877 SLC14A1Q13336 389 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 CTBP1Q13363 440 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 LRP8Q14114 963 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 SLMAPQ14BN4 828 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 SUZ12Q15022 739 aaKnown RBP16.5■□□□□ 0.23
COMMD4-224ENST00000568877 KYNUQ16719 465 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 UAP1L1Q3KQV9 507 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 TEDDM1Q5T9Z0 273 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 STPG1Q5TH74 334 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 CYS1Q717R9 158 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 C11orf96Q7Z7L8 435 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 GKN2Q86XP6 184 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 CNTN4Q8IWV2 1026 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 GSPT2Q8IYD1 628 aaKnown RBP16.5■□□□□ 0.23
COMMD4-224ENST00000568877 SDR16C5Q8N3Y7 309 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 C2CD4AQ8NCU7 369 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-224ENST00000568877 CCL4L1Q8NHW4 92 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.5■□□□□ 0.23
COMMD4-224ENST00000568877 LPGAT1Q92604 370 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 TIMM29Q9BSF4 260 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 GSDMCQ9BYG8 508 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 INTS10Q9NVR2 710 aaKnown RBP16.5■□□□□ 0.23
COMMD4-224ENST00000568877 NINJ2Q9NZG7 142 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 FBXO5Q9UKT4 447 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 VPS9D1Q9Y2B5 631 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 DNMT3AQ9Y6K1 912 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-224ENST00000568877 PRSS21Q9Y6M0 314 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 TMEM131Q92545 1883 aa16.5■□□□□ 0.23
COMMD4-224ENST00000568877 WDR87Q6ZQQ6 2873 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-224ENST00000568877 TCRBV9S1A1TA0A576 114 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 UBA6A0AVT1 1052 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-224ENST00000568877 LMO7DNF2Z398 122 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 QSOX1O00391 747 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 PRMT5O14744 637 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-224ENST00000568877 FAM153BP0C7A2 387 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 OR56A5P0C7T3 313 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 ACP5P13686 325 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 PRLHRP49683 370 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 VSNL1P62760 191 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 INSCQ1MX18 579 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 PLA2G4EQ3MJ16 856 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 FAM153CQ494X1 144 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 WDR93Q6P2C0 686 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 ZNF449Q6P9G9 518 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 DBX2Q6ZNG2 339 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 TAF8Q7Z7C8 310 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 LRRC6Q86X45 466 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 NRROSQ86YC3 692 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 BEND7Q8N7W2 519 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-224ENST00000568877 LINC00615Q96LM1 132 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-224ENST00000568877 P2RY12Q9H244 342 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 CDC42EP4Q9H3Q1 356 aaKnown RBP16.49■□□□□ 0.23
COMMD4-224ENST00000568877 VPS37BQ9H9H4 285 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 FBXO6Q9NRD1 293 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-224ENST00000568877 SLC23A2Q9UGH3 650 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 ST14Q9Y5Y6 855 aa16.49■□□□□ 0.23
COMMD4-224ENST00000568877 TP53BP1Q12888 1972 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-224ENST00000568877 F8W8V4 182 aa16.48■□□□□ 0.23
COMMD4-224ENST00000568877 YY2O15391 372 aa16.48■□□□□ 0.23
COMMD4-224ENST00000568877 ANXA6P08133 673 aa16.48■□□□□ 0.23
COMMD4-224ENST00000568877 GIMD1P0DJR0 217 aa16.48■□□□□ 0.23
COMMD4-224ENST00000568877 CD59P13987 128 aa16.48■□□□□ 0.23
COMMD4-224ENST00000568877 RPS3P23396 243 aaKnown RBP eCLIP16.48■□□□□ 0.23
COMMD4-224ENST00000568877 MCM3P25205 808 aa16.48■□□□□ 0.23
COMMD4-224ENST00000568877 AK4P27144 223 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-224ENST00000568877 STX2P32856 288 aa16.48■□□□□ 0.23
COMMD4-224ENST00000568877 LEPRP48357 1165 aaKnown RBP16.48■□□□□ 0.23
COMMD4-224ENST00000568877 LIMK1P53667 647 aa16.48■□□□□ 0.23
COMMD4-224ENST00000568877 ADARP55265 1226 aaKnown RBP16.48■□□□□ 0.23
COMMD4-224ENST00000568877 MPP1Q00013 466 aa16.48■□□□□ 0.23
COMMD4-224ENST00000568877 ZNF789Q5FWF6 425 aa16.48■□□□□ 0.23
COMMD4-224ENST00000568877 LVRNQ6Q4G3 990 aa16.48■□□□□ 0.23
COMMD4-224ENST00000568877 KIAA0408Q6ZU52 694 aa16.48■□□□□ 0.23
COMMD4-224ENST00000568877 AMZ2Q86W34 360 aa16.48■□□□□ 0.23
COMMD4-224ENST00000568877 CDKL2Q92772 493 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms