RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	JOSD2	Q8TAC2	188 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	DNAJB14	Q8TBM8	379 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	CPA5	Q8WXQ8	436 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	CENPI	Q92674	756 aa	Predicted RBP	13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	CXorf40B	Q96DE9	158 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	PSKH2	Q96QS6	385 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	MAP3K3	Q99759	626 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	CARD9	Q9H257	536 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	DNAJC12	Q9UKB3	198 aa		13.49	□□□□□ -0.25
SMG1-213	ENST00000567737	TRGV8	A0A0C4DH27	118 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	UBA6	A0AVT1	1052 aa	Predicted RBP	13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	BICDL2	A1A5D9	508 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737		C9J4A7	227 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737		K7ELQ4	463 aa	Predicted RBP	13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	CCL21	O00585	134 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	NUAK1	O60285	661 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	MTA2	O94776	668 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	CAPN1	P07384	714 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	ZNF30	P17039	623 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	ARCN1	P48444	511 aa	Known RBP	13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	KCNK10	P57789	538 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	OTUD4	Q01804	1114 aa	Known RBP	13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	PTS	Q03393	145 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	IL10RB	Q08334	325 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	TRAF2	Q12933	501 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	LBR	Q14739	615 aa	Known RBP	13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	ZNF169	Q14929	603 aa	Predicted RBP	13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	SEPT7	Q16181	437 aa	Known RBP	13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	HIF1A	Q16665	826 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	EXOC3L4	Q17RC7	722 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	TMTC4	Q5T4D3	741 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	ARMC12	Q5T9G4	340 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	B3GNTL1	Q67FW5	361 aa	Predicted RBP	13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	KLHL35	Q6PF15	583 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	XKRX	Q6PP77	449 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	CEP97	Q8IW35	865 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	SYTL1	Q8IYJ3	562 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	FAM71A	Q8IYT1	594 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	D2HGDH	Q8N465	521 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	BCORP1	Q8N888	145 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	SMARCE1	Q969G3	411 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	SNX21	Q969T3	373 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	ZNF501	Q96CX3	271 aa	Predicted RBP	13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	CNDP1	Q96KN2	507 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	MCCC2	Q9HCC0	563 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	SLC40A1	Q9NP59	571 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	NEU2	Q9Y3R4	380 aa		13.48	□□□□□ -0.25
SMG1-213	ENST00000567737	DFFA	O00273	331 aa		13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	PGLS	O95336	258 aa		13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	HTR7	P34969	479 aa		13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	RFC1	P35251	1148 aa	Predicted RBP	13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	RORA	P35398	523 aa		13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	HSPA9	P38646	679 aa	Known RBP	13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	HADHA	P40939	763 aa		13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	STX17	P56962	302 aa		13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	SSPN	Q14714	243 aa		13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	INSC	Q1MX18	579 aa		13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	PRAMEF17	Q5VTA0	474 aa		13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	NAA35	Q5VZE5	725 aa		13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	DUS1L	Q6P1R4	473 aa	Known RBP	13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	TRIM72	Q6ZMU5	477 aa		13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	SPOCD1	Q6ZMY3	1216 aa		13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	ZGRF1	Q86YA3	2104 aa		13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	NELFB	Q8WX92	580 aa		13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	GBP5	Q96PP8	586 aa		13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	NUDCD1	Q96RS6	583 aa		13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	CD180	Q99467	661 aa		13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	FANCE	Q9HB96	536 aa		13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	CNOT6	Q9ULM6	557 aa	Known RBP	13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	FZD10	Q9ULW2	581 aa		13.47	□□□□□ -0.25
SMG1-213	ENST00000567737	FER1L5	A0AVI2	2057 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	FAM221A	A4D161	298 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	TLCD2	A6NGC4	264 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	LDB2	O43679	373 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	PON1	P27169	355 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	AIF1	P55008	147 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	SOX8	P57073	446 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	COPS2	P61201	443 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	NOMO3	P69849	1222 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	KRT85	P78386	507 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	SLC10A7	Q0GE19	358 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	PLCL1	Q15111	1095 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	PLA2G4E	Q3MJ16	856 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	TDRD12	Q587J7	1177 aa	Known RBP	13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	ARHGAP36	Q6ZRI8	547 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	DHRS4	Q9BTZ2	278 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	SLC7A5P2	Q9GIP4	190 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	NOD2	Q9HC29	1040 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	ATP13A2	Q9NQ11	1180 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	PCMTD2	Q9NV79	361 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	SOHLH2	Q9NX45	425 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	DNAJC16	Q9Y2G8	782 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	PPIL1	Q9Y3C6	166 aa		13.46	□□□□□ -0.25
SMG1-213	ENST00000567737	PIKFYVE	Q9Y2I7	2098 aa		13.46	□□□□□ -0.26
SMG1-213	ENST00000567737	MDC1	Q14676	2089 aa	Known RBP	13.45	□□□□□ -0.26
SMG1-213	ENST00000567737	OR52A4P	A6NMU1	304 aa		13.45	□□□□□ -0.26
SMG1-213	ENST00000567737	C19orf84	I3L1E1	186 aa		13.45	□□□□□ -0.26
SMG1-213	ENST00000567737	ZBTB11	O95625	1053 aa	Predicted RBP	13.45	□□□□□ -0.26
SMG1-213	ENST00000567737	KRT3	P12035	628 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms