RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 C8orf89P0DMQ9 161 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 CYP2D6P10635 497 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 AREGP15514 252 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 TCF4P15884 667 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 VCLP18206 1134 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 NR1D1P20393 614 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 SFPQP23246 707 aaKnown RBP eCLIP3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 EEF1B2P24534 225 aaKnown RBP3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 NMBRP28336 390 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 RPS19P39019 145 aaKnown RBP3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 SERPINH1P50454 418 aaKnown RBP3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 NAGLUP54802 743 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 INHBEP58166 350 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 C21orf58P58505 322 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 HNRNPKP61978 463 aaKnown RBP eCLIP3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 SIRPAP78324 504 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 MRPS34P82930 218 aaKnown RBP3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 FOLH1Q04609 750 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 SLC18A2Q05940 514 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 COX10Q12887 443 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 KLF10Q13118 480 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 CUL2Q13617 745 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 ARHGEF6Q15052 776 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 PNLIPRP3Q17RR3 467 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 USP41Q3LFD5 358 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 FUT11Q495W5 492 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 LDLRAP1Q5SW96 308 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 RAET1GQ6H3X3 334 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 PODNL1Q6PEZ8 512 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 CCBE1Q6UXH8 406 aaPredicted RBP3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 WDR88Q6ZMY6 472 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 SGMS1Q86VZ5 419 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 MCEMP1Q8IX19 187 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 CFAP206Q8IYR0 622 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 PARP16Q8N5Y8 322 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 ANKRD13CQ8N6S4 541 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 CLEC1AQ8NC01 280 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 ABHD11Q8NFV4 315 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 OCC1Q8TAD7 63 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 LRRC8CQ8TDW0 803 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 ARHGAP45Q92619 1136 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 PIGKQ92643 395 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 CELF1Q92879 486 aaKnown RBP3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 FBXL8Q96CD0 374 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 TUBGCP3Q96CW5 907 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 ERLEC1Q96DZ1 483 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 PTCD3Q96EY7 689 aaKnown RBP3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 DTD2Q96FN9 168 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 ZNF419Q96HQ0 510 aaPredicted RBP3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 EGLN2Q96KS0 407 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 NSMCE2Q96MF7 247 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 MS4A10Q96PG2 267 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 MNTQ99583 582 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 SEMA3CQ99985 751 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 ACPTQ9BZG2 426 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 CHMP4BQ9H444 224 aaKnown RBP3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 FN3KQ9H479 309 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 SRD5A3Q9H8P0 318 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 GPN1Q9HCN4 374 aaPredicted RBP3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 WDR6Q9NNW5 1121 aaKnown RBP3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 GPR108Q9NPR9 543 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 CD93Q9NPY3 652 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 EQTNQ9NQ60 294 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 MTMR10Q9NXD2 777 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 EHD3Q9NZN3 535 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 OR6C3Q9NZP0 311 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 FBXO40Q9UH90 709 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 TRMT6Q9UJA5 497 aaKnown RBP3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 PTBP2Q9UKA9 531 aaKnown RBP3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 CCPG1Q9ULG6 757 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 GABRQQ9UN88 632 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 SNX6Q9UNH7 406 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 ERVK-11Q9UQG0 969 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 C2CD2Q9Y426 696 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 TCAF1Q9Y4C2 921 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 TOP2BQ02880 1626 aa3.3□□□□□ -1.88
HERPUD1-211ENST00000566550 NPHP3Q7Z494 1330 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 MAGEA13PA6NCF6 341 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 NPEPPSL1A6NEC2 478 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 C5orf52A6NGY3 159 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 C2orf81A6NN90 581 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 FOXO6A8MYZ6 492 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 VWC2LB2RUY7 222 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 DIRC3C9JPN6 131 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 BOLA2-SMG1P6H3BVE0 249 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 SOCS6O14544 535 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 PPIP5K2O43314 1243 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 LAMTOR5O43504 91 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 B4GALT3O60512 393 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 PRAMEF11O60813 436 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 MTX2O75431 263 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 CDKL5O76039 1030 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 GH2P01242 217 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 LCATP04180 440 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 NPSP0C0P6 89 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 SFTPCP11686 197 aa3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 APEHP13798 732 aaKnown RBP3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 ACAT1P24752 427 aaKnown RBP3.29□□□□□ -1.88
HERPUD1-211ENST00000566550 ITGB8P26012 769 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms