RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 UTP6Q9NYH9 597 aaKnown RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 HACD3Q9P035 362 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 IL36AQ9UHA7 158 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 SLC27A6Q9Y2P4 619 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 COQ6Q9Y2Z9 468 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 USH1CQ9Y6N9 552 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 SDK1Q7Z5N4 2213 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 LRRK1Q38SD2 2015 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 GOLGA8QA0A0J9YX86 632 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 A0A1B0GTL3 188 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 GOLGA8OA6NCC3 632 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 A8MT66 165 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 GOLGA8NF8WBI6 632 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 UBFD1O14562 309 aaKnown RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 TRIM16O95361 564 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 TGDSO95455 350 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 NFATC1O95644 943 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 HSPA4LO95757 839 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 TSPAN12O95859 305 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 MTHFD2P13995 350 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 PKMP14618 531 aaKnown RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 PSMC3P17980 439 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 TARSP26639 723 aaKnown RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 IL12RB1P42701 662 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 TTPAP49638 278 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 CLCN7P51798 805 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 CORO7P57737 925 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 RPL26P61254 145 aaKnown RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 B4GALNT1Q00973 533 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 RAD51Q06609 339 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 DMC1Q14565 340 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 ACAP2Q15057 778 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 TSNQ15631 228 aaKnown RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 PFKFB4Q16877 469 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 GALNTL6Q49A17 601 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.16□□□□□ -1.42
CHD9-217ENST00000565832 SAMD5Q5TGI4 173 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 AGAP9Q5VTM2 703 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 LIPMQ5VYY2 423 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 CES5AQ6NT32 575 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 USP45Q70EL2 814 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 YTHDF3Q7Z739 585 aaKnown RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 MMAAQ8IVH4 418 aaKnown RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 WDR75Q8IWA0 830 aaKnown RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 TRIM42Q8IWZ5 723 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 LMNTD2Q8IXW0 634 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 CPNE9Q8IYJ1 553 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 GABPB2Q8TAK5 448 aaPredicted RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 TMEM237Q96Q45 408 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 MCCC1Q96RQ3 725 aaPredicted RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 TCF12Q99081 682 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 NMUR2Q9GZQ4 415 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 P2RY12Q9H244 342 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 CCDC68Q9H2F9 335 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 WDR55Q9H6Y2 383 aaPredicted RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 COG4Q9H9E3 785 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 TRPV4Q9HBA0 871 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 DZANK1Q9NVP4 752 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 THG1LQ9NWX6 298 aaKnown RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 TAS2R13Q9NYV9 303 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 ZMYM5Q9UJ78 669 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 HAO1Q9UJM8 370 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 RPL26L1Q9UNX3 145 aaKnown RBP6.16□□□□□ -1.42
CHD9-217ENST00000565832 PPIL1Q9Y3C6 166 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 FIS1Q9Y3D6 152 aa6.16□□□□□ -1.42
CHD9-217ENST00000565832 PLXNB3Q9ULL4 1909 aa6.15□□□□□ -1.42
CHD9-217ENST00000565832 TRPM6Q9BX84 2022 aa6.15□□□□□ -1.42
CHD9-217ENST00000565832 KRT87PA6NCN2 255 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 MYO1CO00159 1063 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 KAT7O95251 611 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 SLC25A14O95258 325 aaPredicted RBP6.15□□□□□ -1.43
CHD9-217ENST00000565832 IL1BP01584 269 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 EPHX1P07099 455 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 GRK2P25098 689 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 ACRV1P26436 265 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 PTGER3P43115 390 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 SPINT3P49223 89 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 GALK1P51570 392 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 SUOXP51687 545 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 HK3P52790 923 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 ALDH18A1P54886 795 aaKnown RBP6.15□□□□□ -1.43
CHD9-217ENST00000565832 ST8SIA6P61647 398 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 PFKPQ01813 784 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 UBAP2LQ14157 1087 aaKnown RBP6.15□□□□□ -1.43
CHD9-217ENST00000565832 CCDC85BQ15834 202 aaPredicted RBP6.15□□□□□ -1.43
CHD9-217ENST00000565832 C18orf21Q32NC0 220 aaPredicted RBP6.15□□□□□ -1.43
CHD9-217ENST00000565832 KHDC1Q4VXA5 237 aaKnown RBP6.15□□□□□ -1.43
CHD9-217ENST00000565832 SLC9B1Q4ZJI4 515 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 ZNF805Q5CZA5 627 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 ARMC3Q5W041 872 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 EGFLAMQ63HQ2 1017 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 GRAMD4Q6IC98 578 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 TXNDC11Q6PKC3 985 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 SERPINA13PQ6UXR4 307 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 PARS2Q7L3T8 475 aaKnown RBP6.15□□□□□ -1.43
CHD9-217ENST00000565832 SNX20Q7Z614 316 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 CLNKQ7Z7G1 428 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 YAF2Q8IY57 180 aa6.15□□□□□ -1.43
CHD9-217ENST00000565832 C10orf67Q8IYJ2 551 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms