RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 CCNYL3P0C7X3 344 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 PRKAR1AP10644 381 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 BRAFP15056 766 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 HLA-DPA1P20036 260 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 LPOP22079 712 aaPredicted RBP6.3□□□□□ -1.4
TCF4-228ENST00000565393 PBLDP30039 288 aaPredicted RBP6.3□□□□□ -1.4
TCF4-228ENST00000565393 AKT1P31749 480 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 MARCKSL1P49006 195 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 GEMP55040 296 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 HADHBP55084 474 aaKnown RBP6.3□□□□□ -1.4
TCF4-228ENST00000565393 GFERP55789 205 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 RWDD2BP57060 319 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 EIF3EP60228 445 aaKnown RBP6.3□□□□□ -1.4
TCF4-228ENST00000565393 COPS2P61201 443 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 UBE2IP63279 158 aaKnown RBP6.3□□□□□ -1.4
TCF4-228ENST00000565393 TMPRSS15P98073 1019 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 NFKB2Q00653 900 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 XRCC4Q13426 336 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 ITGA9Q13797 1035 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 GPR18Q14330 331 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 CLCA4Q14CN2 919 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 TAF1AQ15573 450 aaPredicted RBP6.3□□□□□ -1.4
TCF4-228ENST00000565393 TAZQ16635 292 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 LONRF2Q1L5Z9 754 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 KHDC1Q4VXA5 237 aaKnown RBP6.3□□□□□ -1.4
TCF4-228ENST00000565393 LDLRAP1Q5SW96 308 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 AGAP9Q5VTM2 703 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 ITPRIPL1Q6GPH6 555 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 C11orf63Q6NUN7 778 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 ARMC6Q6NXE6 501 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 KLHL35Q6PF15 583 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 BORAQ6PGQ7 559 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 SARM1Q6SZW1 724 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 C6orf15Q6UXA7 325 aaPredicted RBP6.3□□□□□ -1.4
TCF4-228ENST00000565393 WASH2PQ6VEQ5 465 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 TIPARPQ7Z3E1 657 aaKnown RBP6.3□□□□□ -1.4
TCF4-228ENST00000565393 TMTC1Q8IUR5 882 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 ZNF547Q8IVP9 402 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 RBM12BQ8IXT5 1001 aaKnown RBP6.3□□□□□ -1.4
TCF4-228ENST00000565393 CFAP206Q8IYR0 622 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 TTC30BQ8N4P2 665 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 BMPERQ8N8U9 685 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 KRT35Q92764 455 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 LRRC45Q96CN5 670 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 DCUN1D1Q96GG9 259 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 OXNAD1Q96HP4 312 aaPredicted RBP6.3□□□□□ -1.4
TCF4-228ENST00000565393 CALR3Q96L12 384 aaKnown RBP6.3□□□□□ -1.4
TCF4-228ENST00000565393 OR6C1Q96RD1 312 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 FAM118BQ9BPY3 351 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 FICDQ9BVA6 458 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 ULBP3Q9BZM4 244 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 ZCCHC2Q9C0B9 1178 aaKnown RBP6.3□□□□□ -1.4
TCF4-228ENST00000565393 TRIT1Q9H3H1 467 aaKnown RBP6.3□□□□□ -1.4
TCF4-228ENST00000565393 FAM96AQ9H5X1 160 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 ASB8Q9H765 288 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 UCK1Q9HA47 277 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 WASH6PQ9NQA3 447 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 POT1Q9NUX5 634 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 IMP3Q9NV31 184 aaKnown RBP6.3□□□□□ -1.4
TCF4-228ENST00000565393 OGFRQ9NZT2 677 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 IL17CQ9P0M4 197 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 FAM8A1Q9UBU6 413 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 TMPRSS11EQ9UL52 423 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 WDR37Q9Y2I8 494 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 AAR2Q9Y312 384 aaKnown RBP6.3□□□□□ -1.4
TCF4-228ENST00000565393 KCTD3Q9Y597 815 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 PCDHB3Q9Y5E6 796 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 DNMT3AQ9Y6K1 912 aaPredicted RBP6.3□□□□□ -1.4
TCF4-228ENST00000565393 DUSP10Q9Y6W6 482 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 DOCK9Q9BZ29 2069 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 AKAP13Q12802 2813 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 KNL1Q8NG31 2342 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 CABIN1Q9Y6J0 2220 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 UBA6A0AVT1 1052 aaPredicted RBP6.29□□□□□ -1.4
TCF4-228ENST00000565393 CCDC66A2RUB6 948 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 C5orf60A6NFR6 353 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 SOWAHDA6NJG2 315 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 APOC4-APOC2K7ER74 178 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 TOX3O15405 576 aaPredicted RBP6.29□□□□□ -1.4
TCF4-228ENST00000565393 KIF1CO43896 1103 aaKnown RBP6.29□□□□□ -1.4
TCF4-228ENST00000565393 PPFIA2O75334 1257 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 SRP72O76094 671 aaKnown RBP6.29□□□□□ -1.4
TCF4-228ENST00000565393 NDUFA10O95299 355 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 WISP1O95388 367 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 LCA5LO95447 670 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 CRTAMO95727 393 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 APOC2P02655 101 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 C9P02748 559 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 RBP3P10745 1247 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 PYGMP11217 842 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 RALBP11234 206 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 TCN2P20062 427 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 ZNF75DP51815 510 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 CTSCP53634 463 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 SH3BP2P78314 561 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 PDE1BQ01064 536 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 MC1RQ01726 317 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 OTUD4Q01804 1114 aaKnown RBP6.29□□□□□ -1.4
TCF4-228ENST00000565393 ABHD18Q0P651 414 aa6.29□□□□□ -1.4
TCF4-228ENST00000565393 NFE2L1Q14494 772 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms