RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 AAR2Q9Y312 384 aaKnown RBP13.43□□□□□ -0.26
VPS9D1-204ENST00000565023 A6NCN8 305 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 C5orf60A6NFR6 353 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 C2orf81A6NN90 581 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 CCL22O00626 93 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 CHUKO15111 745 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 LIASO43766 372 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 DUX1O43812 170 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 VEGFDO43915 354 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 CEP104O60308 925 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 ZIC2O95409 532 aaPredicted RBP13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 VIPP01282 170 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 LPOP22079 712 aaPredicted RBP13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 CXCR5P32302 372 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 GDF10P55107 478 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 OASLQ15646 514 aaKnown RBP13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 SOWAHCQ53LP3 525 aaPredicted RBP13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 GPRC6AQ5T6X5 926 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 TMEM220Q6QAJ8 160 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 CLEC14AQ86T13 490 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 ZFAND4Q86XD8 727 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 ZNF547Q8IVP9 402 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 RASGEF1CQ8N431 466 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 OR13C4Q8NGS5 318 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 JPH3Q8WXH2 748 aaPredicted RBP13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 VPS35Q96QK1 796 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 TMEM121Q9BTD3 319 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 FAM96AQ9H5X1 160 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 ASB8Q9H765 288 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 PIH1D1Q9NWS0 290 aaKnown RBP13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 FOXJ2Q9P0K8 574 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 CPNE7Q9UBL6 633 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 ZKSCAN5Q9Y2L8 839 aa13.42□□□□□ -0.26
VPS9D1-204ENST00000565023 KIR2DS5A0A0G2JLQ3 304 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 A0A0G2JNG1 304 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 CCDC78A2IDD5 438 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 EIF4E1BA6NMX2 242 aaKnown RBP13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 KIR2DS3K7RE56 304 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 GAPDHSO14556 408 aaPredicted RBP13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 PRAMEF1O95521 474 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 METTL18O95568 372 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 FGGP02679 453 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 TYRP1P17643 537 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 TPH1P17752 444 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 MSH3P20585 1137 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 CSTF2P33240 577 aaKnown RBP eCLIP13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 ADRA1AP35348 466 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 CTSCP53634 463 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 LIMK2P53671 638 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 TMPRSS3P57727 454 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 GPLD1P80108 840 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 SRSF6Q13247 344 aaKnown RBP13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 CLN3Q13286 438 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 ITGA9Q13797 1035 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 SEPT6Q14141 434 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 KIR2DS5Q14953 304 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 TAF1AQ15573 450 aaPredicted RBP13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 CCNG2Q16589 344 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 LDLRAP1Q5SW96 308 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 ZDHHC20Q5W0Z9 365 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 RANBP10Q6VN20 620 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 GPR155Q7Z3F1 870 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 FAM129CQ86XR2 697 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 BEND7Q8N7W2 519 aaPredicted RBP13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 RASGEF1AQ8N9B8 481 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 OR4D9Q8NGE8 314 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 ZNF398Q8TD17 642 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 MAIP1Q8WWC4 291 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 C1orf54Q8WWF1 131 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 PMEPA1Q969W9 287 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 SH3KBP1Q96B97 665 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 RTP4Q96DX8 246 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 RNF31Q96EP0 1072 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 CCDC97Q96F63 343 aaPredicted RBP13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 PBKQ96KB5 322 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 BBC3Q96PG8 261 aaPredicted RBP13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 TIMM29Q9BSF4 260 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 DPH1Q9BZG8 443 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 SARS2Q9NP81 518 aaKnown RBP13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 TTC7AQ9ULT0 858 aaPredicted RBP13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 PSMD13Q9UNM6 376 aa13.41□□□□□ -0.26
VPS9D1-204ENST00000565023 OR5K4A6NMS3 321 aa13.4□□□□□ -0.26
VPS9D1-204ENST00000565023 OR52A4PA6NMU1 304 aa13.4□□□□□ -0.26
VPS9D1-204ENST00000565023 EFCAB7A8K855 629 aa13.4□□□□□ -0.26
VPS9D1-204ENST00000565023 GPR89AB7ZAQ6 455 aa13.4□□□□□ -0.26
VPS9D1-204ENST00000565023 POP7O75817 140 aaKnown RBP13.4□□□□□ -0.26
VPS9D1-204ENST00000565023 CRTAMO95727 393 aa13.4□□□□□ -0.26
VPS9D1-204ENST00000565023 IFNB1P01574 187 aa13.4□□□□□ -0.26
VPS9D1-204ENST00000565023 GPR89BP0CG08 455 aa13.4□□□□□ -0.26
VPS9D1-204ENST00000565023 THRAP10827 490 aa13.4□□□□□ -0.26
VPS9D1-204ENST00000565023 VCLP18206 1134 aa13.4□□□□□ -0.26
VPS9D1-204ENST00000565023 IDSP22304 550 aa13.4□□□□□ -0.26
VPS9D1-204ENST00000565023 STIP1P31948 543 aaKnown RBP13.4□□□□□ -0.26
VPS9D1-204ENST00000565023 SLC19A1P41440 591 aa13.4□□□□□ -0.26
VPS9D1-204ENST00000565023 MLLT3P42568 568 aaPredicted RBP13.4□□□□□ -0.26
VPS9D1-204ENST00000565023 SNX1Q13596 522 aa13.4□□□□□ -0.26
VPS9D1-204ENST00000565023 LONRF2Q1L5Z9 754 aa13.4□□□□□ -0.26
VPS9D1-204ENST00000565023 FNBP1LQ5T0N5 605 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms