RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 CCDC175P0C221 793 aa17.54■□□□□ 0.4
CMTM3-204ENST00000562357 LIPCP11150 499 aa17.54■□□□□ 0.4
CMTM3-204ENST00000562357 RALBP11234 206 aa17.54■□□□□ 0.4
CMTM3-204ENST00000562357 HOXB3P14651 431 aaPredicted RBP17.54■□□□□ 0.4
CMTM3-204ENST00000562357 CLN3Q13286 438 aa17.54■□□□□ 0.4
CMTM3-204ENST00000562357 ZNF574Q6ZN55 896 aaPredicted RBP17.54■□□□□ 0.4
CMTM3-204ENST00000562357 FAM129CQ86XR2 697 aa17.54■□□□□ 0.4
CMTM3-204ENST00000562357 PLXDC1Q8IUK5 500 aa17.54■□□□□ 0.4
CMTM3-204ENST00000562357 ZNF547Q8IVP9 402 aa17.54■□□□□ 0.4
CMTM3-204ENST00000562357 USP7Q93009 1102 aa17.54■□□□□ 0.4
CMTM3-204ENST00000562357 DCUN1D1Q96GG9 259 aa17.54■□□□□ 0.4
CMTM3-204ENST00000562357 B3GNT4Q9C0J1 378 aa17.54■□□□□ 0.4
CMTM3-204ENST00000562357 UCK1Q9HA47 277 aa17.54■□□□□ 0.4
CMTM3-204ENST00000562357 SLC23A2Q9UGH3 650 aa17.54■□□□□ 0.4
CMTM3-204ENST00000562357 CRLS1Q9UJA2 301 aa17.54■□□□□ 0.4
CMTM3-204ENST00000562357 ACSL6Q9UKU0 697 aa17.54■□□□□ 0.4
CMTM3-204ENST00000562357 LAMA5O15230 3695 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 KIF26BQ2KJY2 2108 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 PRAMEF33A0A0G2JMD5 474 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 PRAMEF10O60809 474 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 SRP72O76094 671 aaKnown RBP17.53■□□□□ 0.4
CMTM3-204ENST00000562357 GAS8O95995 478 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 XRCC1P18887 633 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-204ENST00000562357 ITGALP20701 1170 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 MPSTP25325 297 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 RPL10P27635 214 aaKnown RBP17.53■□□□□ 0.4
CMTM3-204ENST00000562357 UBE2IP63279 158 aaKnown RBP17.53■□□□□ 0.4
CMTM3-204ENST00000562357 VAC14Q08AM6 782 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 SPARCL1Q14515 664 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 RPS6KA1Q15418 735 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 SNAP47Q5SQN1 464 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 AGAP9Q5VTM2 703 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 TMEM220Q6QAJ8 160 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 ABRAXAS1Q6UWZ7 409 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 WASH2PQ6VEQ5 465 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 CCDC81Q6ZN84 652 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 RBM12BQ8IXT5 1001 aaKnown RBP17.53■□□□□ 0.4
CMTM3-204ENST00000562357 SLC35B2Q8TB61 432 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 ULK4Q96C45 1275 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 TAAR9Q96RI9 348 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 C19orf43Q9BQ61 176 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 TMEM121Q9BTD3 319 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 ARNT2Q9HBZ2 717 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 WASH6PQ9NQA3 447 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 FKBPLQ9UIM3 349 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 DNMT3AQ9Y6K1 912 aaPredicted RBP17.53■□□□□ 0.4
CMTM3-204ENST00000562357 SLC30A1Q9Y6M5 507 aa17.53■□□□□ 0.4
CMTM3-204ENST00000562357 PTPRQQ9UMZ3 2332 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 KLHL33A6NCF5 533 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 OR2AG2A6NM03 316 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 CFAP99D6REC4 459 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 GPR39O43194 453 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 POP7O75817 140 aaKnown RBP17.52■□□□□ 0.4
CMTM3-204ENST00000562357 CCL4P13236 92 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 AMD1P17707 334 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 STIP1P31948 543 aaKnown RBP17.52■□□□□ 0.4
CMTM3-204ENST00000562357 ETV5P41161 510 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 LMAN1P49257 510 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 DRG2P55039 364 aaKnown RBP17.52■□□□□ 0.4
CMTM3-204ENST00000562357 RAB15P59190 212 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 OLIG2Q13516 323 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 PTPRCAPQ14761 206 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 ARHGAP40Q5TG30 622 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 TMEM26Q6ZUK4 368 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 RASGEF1AQ8N9B8 481 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 HEXDCQ8WVB3 486 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 CCNL2Q96S94 520 aaPredicted RBP17.52■□□□□ 0.4
CMTM3-204ENST00000562357 TBC1D10AQ9BXI6 508 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 CPNE5Q9HCH3 593 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 TMEM9Q9P0T7 183 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 R3HDM2Q9Y2K5 976 aaKnown RBP17.52■□□□□ 0.4
CMTM3-204ENST00000562357 ITPR1Q14643 2758 aa17.52■□□□□ 0.4
CMTM3-204ENST00000562357 ZFC3H1O60293 1989 aaKnown RBP17.51■□□□□ 0.39
CMTM3-204ENST00000562357 A8MU76 341 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 B4E171 279 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 E7EVH7 732 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 UBXN7O94888 489 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 PBLDP30039 288 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-204ENST00000562357 SLC19A1P41440 591 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 TSPAN7P41732 249 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 TMPRSS15P98073 1019 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 RHDQ02161 417 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 DMPKQ09013 629 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 SEPT6Q14141 434 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 FNBP1LQ5T0N5 605 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 DET1Q7L5Y6 550 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 C11orf96Q7Z7L8 435 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 LINC00523Q86TU6 105 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 SLC13A5Q86YT5 568 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-204ENST00000562357 BEND7Q8N7W2 519 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-204ENST00000562357 ART4Q93070 314 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 ASPSCR1Q9BZE9 553 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 LZTFL1Q9NQ48 299 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 SLC39A1Q9NY26 324 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 FOXJ2Q9P0K8 574 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 SCHIP1Q9P0W5 487 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-204ENST00000562357 ZNF624Q9P2J8 865 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-204ENST00000562357 PDP2Q9P2J9 529 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 KLHL3Q9UH77 587 aa17.51■□□□□ 0.39
CMTM3-204ENST00000562357 ZNF148Q9UQR1 794 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms