RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 SH3KBP1Q96B97 665 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 UGT1A7Q9HAW7 530 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 UGT1A10Q9HAW8 530 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 UGT1A8Q9HAW9 530 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 OCIAD1Q9NX40 245 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 ZNF624Q9P2J8 865 aaPredicted RBP16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 IMPACTQ9P2X3 320 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 KLHL3Q9UH77 587 aa16.93■□□□□ 0.3
CDC42BPB-208ENST00000561271 LILRA5A6NI73 299 aa16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 EFCAB7A8K855 629 aa16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 STX7O15400 261 aaKnown RBP16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 DDX3YO15523 660 aaKnown RBP16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 PRAMEF1O95521 474 aa16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 BRAFP15056 766 aa16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 ITGA9Q13797 1035 aa16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 PRPSAP1Q14558 356 aa16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 GPRC6AQ5T6X5 926 aa16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 TMEM164Q5U3C3 297 aa16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 WDR74Q6RFH5 385 aaPredicted RBP16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 RANBP10Q6VN20 620 aa16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 SYCE1Q8N0S2 351 aa16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 UBL4BQ8N7F7 174 aa16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 RASGEF1AQ8N9B8 481 aa16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 AVL9Q8NBF6 648 aa16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 SNRNP27Q8WVK2 155 aaKnown RBP16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 TTC25Q96NG3 672 aa16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 ZCCHC2Q9C0B9 1178 aaKnown RBP16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 FKBPLQ9UIM3 349 aa16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 KCTD3Q9Y597 815 aa16.92■□□□□ 0.3
CDC42BPB-208ENST00000561271 HELZ2Q9BYK8 2649 aaKnown RBP16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 OR2AG2A6NM03 316 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 OR52A4PA6NMU1 304 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 MIF4GDA9UHW6 222 aaKnown RBP16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 ERVH48-1M5A8F1 160 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 EFSO43281 561 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 C1QL1O75973 258 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 VIPP01282 170 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 PBLDP30039 288 aaPredicted RBP16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 AKT1P31749 480 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 SLC19A1P41440 591 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 GFERP55789 205 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 RHDQ02161 417 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 SPARCL1Q14515 664 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 TAF1AQ15573 450 aaPredicted RBP16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 TAF1BQ53T94 588 aaPredicted RBP16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 LDLRAP1Q5SW96 308 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 TMEM26Q6ZUK4 368 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 CCDC112Q8NEF3 446 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 OR4K2Q8NGD2 314 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 DTX3LQ8TDB6 740 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 BRSK1Q8TDC3 778 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 NAT14Q8WUY8 206 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 JPH3Q8WXH2 748 aaPredicted RBP16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 TAAR9Q96RI9 348 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 TBL1YQ9BQ87 522 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 SMOXQ9NWM0 555 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 OGFRQ9NZT2 677 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 PDP2Q9P2J9 529 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 R3HDM2Q9Y2K5 976 aaKnown RBP16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 AAR2Q9Y312 384 aaKnown RBP16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 B3GALT1Q9Y5Z6 326 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 MN1Q10571 1320 aaPredicted RBP16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 ZNF462Q96JM2 2506 aa16.91■□□□□ 0.3
CDC42BPB-208ENST00000561271 TLN1Q9Y490 2541 aaKnown RBP16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 TCRBV7S2A1N4TA0A589 114 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 GOLGA6L9A6NEM1 432 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 PPFIA2O75334 1257 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 TYRP1P17643 537 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 VCLP18206 1134 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 XRCC1P18887 633 aaPredicted RBP16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 LPOP22079 712 aaPredicted RBP16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 IDSP22304 550 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 CD82P27701 267 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 KLF1Q13351 362 aaPredicted RBP16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 MANEAQ5SRI9 462 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 ANKS6Q68DC2 871 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 FAM83HQ6ZRV2 1179 aaPredicted RBP16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 ARHGEF18Q6ZSZ5 1173 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 DET1Q7L5Y6 550 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 DTX1Q86Y01 620 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 TXLNBQ8N3L3 684 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 BMPERQ8N8U9 685 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 FAM71DQ8N9W8 422 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 OR13C4Q8NGS5 318 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 TTC9Q92623 222 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 POT1Q9NUX5 634 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 SLC39A1Q9NY26 324 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 WDR37Q9Y2I8 494 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 PCDHGA3Q9Y5H0 932 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 SLC30A1Q9Y6M5 507 aa16.9■□□□□ 0.3
CDC42BPB-208ENST00000561271 C2orf81A6NN90 581 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 B4E171 279 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 STMND1H3BQB6 276 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 CCL22O00626 93 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 TSPAN7P41732 249 aa16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 ZNF140P52738 457 aaPredicted RBP16.89■□□□□ 0.29
CDC42BPB-208ENST00000561271 GDF10P55107 478 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms