RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 DMKNQ6E0U4 476 aaPredicted RBP2.22□□□□□ -2.05
SPG11-222ENST00000560435 LCN10Q6JVE6 187 aa2.22□□□□□ -2.05
SPG11-222ENST00000560435 SLC16A9Q7RTY1 509 aa2.22□□□□□ -2.05
SPG11-222ENST00000560435 PLD3Q8IV08 490 aa2.22□□□□□ -2.05
SPG11-222ENST00000560435 ANKRD13AQ8IZ07 590 aa2.22□□□□□ -2.05
SPG11-222ENST00000560435 ZNF843Q8N446 348 aa2.22□□□□□ -2.05
SPG11-222ENST00000560435 ZFAND2BQ8WV99 257 aa2.22□□□□□ -2.05
SPG11-222ENST00000560435 TRAPPC12Q8WVT3 735 aa2.22□□□□□ -2.05
SPG11-222ENST00000560435 PPP1R13BQ96KQ4 1090 aa2.22□□□□□ -2.05
SPG11-222ENST00000560435 CLEC7AQ9BXN2 247 aa2.22□□□□□ -2.05
SPG11-222ENST00000560435 UPF3AQ9H1J1 476 aaKnown RBP2.22□□□□□ -2.05
SPG11-222ENST00000560435 GEMIN8Q9NWZ8 242 aaKnown RBP2.22□□□□□ -2.05
SPG11-222ENST00000560435 ERAP1Q9NZ08 941 aa2.22□□□□□ -2.05
SPG11-222ENST00000560435 HCN3Q9P1Z3 774 aa2.22□□□□□ -2.05
SPG11-222ENST00000560435 COL16A1Q07092 1604 aaPredicted RBP2.21□□□□□ -2.06
SPG11-222ENST00000560435 SOCS3O14543 225 aa2.21□□□□□ -2.06
SPG11-222ENST00000560435 ZNF197O14709 1029 aa2.21□□□□□ -2.06
SPG11-222ENST00000560435 CDC123O75794 336 aaPredicted RBP2.21□□□□□ -2.06
SPG11-222ENST00000560435 PARNO95453 639 aaKnown RBP2.21□□□□□ -2.06
SPG11-222ENST00000560435 PRB2P02812 416 aaPredicted RBP2.21□□□□□ -2.06
SPG11-222ENST00000560435 IFIT2P09913 472 aaKnown RBP2.21□□□□□ -2.06
SPG11-222ENST00000560435 PRKG1Q13976 671 aa2.21□□□□□ -2.06
SPG11-222ENST00000560435 RRS1Q15050 365 aaKnown RBP2.21□□□□□ -2.06
SPG11-222ENST00000560435 POSTNQ15063 836 aa2.21□□□□□ -2.06
SPG11-222ENST00000560435 NDUFAF5Q5TEU4 345 aa2.21□□□□□ -2.06
SPG11-222ENST00000560435 PP632Q6XCG6 107 aa2.21□□□□□ -2.06
SPG11-222ENST00000560435 RRM2BQ7LG56 351 aa2.21□□□□□ -2.06
SPG11-222ENST00000560435 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.21□□□□□ -2.06
SPG11-222ENST00000560435 TBC1D1Q86TI0 1168 aaPredicted RBP2.21□□□□□ -2.06
SPG11-222ENST00000560435 MYLK4Q86YV6 388 aaPredicted RBP2.21□□□□□ -2.06
SPG11-222ENST00000560435 TICAM1Q8IUC6 712 aa2.21□□□□□ -2.06
SPG11-222ENST00000560435 LSMEM2Q8N112 164 aa2.21□□□□□ -2.06
SPG11-222ENST00000560435 POM121L12Q8N7R1 296 aa2.21□□□□□ -2.06
SPG11-222ENST00000560435 PPP4R1Q8TF05 950 aa2.21□□□□□ -2.06
SPG11-222ENST00000560435 GTF3AQ92664 365 aaKnown RBP2.21□□□□□ -2.06
SPG11-222ENST00000560435 COG8Q96MW5 612 aa2.21□□□□□ -2.06
SPG11-222ENST00000560435 KRT12Q99456 494 aa2.21□□□□□ -2.06
SPG11-222ENST00000560435 REEP2Q9BRK0 252 aa2.21□□□□□ -2.06
SPG11-222ENST00000560435 FAM167BQ9BTA0 163 aa2.21□□□□□ -2.06
SPG11-222ENST00000560435 PAGR1Q9BTK6 254 aa2.21□□□□□ -2.06
SPG11-222ENST00000560435 PANK3Q9H999 370 aa2.21□□□□□ -2.06
SPG11-222ENST00000560435 AAR2Q9Y312 384 aaKnown RBP2.21□□□□□ -2.06
SPG11-222ENST00000560435 GAGE10A6NGK3 116 aa2.2□□□□□ -2.06
SPG11-222ENST00000560435 USP17L23D6RBM5 183 aa2.2□□□□□ -2.06
SPG11-222ENST00000560435 KHDRBS3O75525 346 aaKnown RBP2.2□□□□□ -2.06
SPG11-222ENST00000560435 ZSCAN5DPP0CG00 497 aa2.2□□□□□ -2.06
SPG11-222ENST00000560435 CDAP32320 146 aa2.2□□□□□ -2.06
SPG11-222ENST00000560435 GNAQP50148 359 aa2.2□□□□□ -2.06
SPG11-222ENST00000560435 HLCSP50747 726 aa2.2□□□□□ -2.06
SPG11-222ENST00000560435 MMP15P51511 669 aa2.2□□□□□ -2.06
SPG11-222ENST00000560435 CDH15P55291 814 aa2.2□□□□□ -2.06
SPG11-222ENST00000560435 MFAP5Q13361 173 aa2.2□□□□□ -2.06
SPG11-222ENST00000560435 NFATC2Q13469 925 aa2.2□□□□□ -2.06
SPG11-222ENST00000560435 DRP2Q13474 957 aa2.2□□□□□ -2.06
SPG11-222ENST00000560435 CAPRIN1Q14444 709 aaKnown RBP2.2□□□□□ -2.06
SPG11-222ENST00000560435 SEL1L3Q68CR1 1132 aa2.2□□□□□ -2.06
SPG11-222ENST00000560435 FASTKD5Q7L8L6 764 aaKnown RBP2.2□□□□□ -2.06
SPG11-222ENST00000560435 MARCH9Q86YJ5 346 aa2.2□□□□□ -2.06
SPG11-222ENST00000560435 PM20D2Q8IYS1 436 aa2.2□□□□□ -2.06
SPG11-222ENST00000560435 NGEFQ8N5V2 710 aa2.2□□□□□ -2.06
SPG11-222ENST00000560435 C17orf47Q8NEP4 570 aa2.2□□□□□ -2.06
SPG11-222ENST00000560435 OR2T11Q8NH01 316 aa2.2□□□□□ -2.06
SPG11-222ENST00000560435 INTS2Q9H0H0 1204 aaKnown RBP2.2□□□□□ -2.06
SPG11-222ENST00000560435 SIL1Q9H173 461 aa2.2□□□□□ -2.06
SPG11-222ENST00000560435 TTYH1Q9H313 450 aaPredicted RBP2.2□□□□□ -2.06
SPG11-222ENST00000560435 NUDT4Q9NZJ9 180 aa2.2□□□□□ -2.06
SPG11-222ENST00000560435 ZBTB25P24278 435 aa2.19□□□□□ -2.06
SPG11-222ENST00000560435 RBMS1P29558 406 aaKnown RBP2.19□□□□□ -2.06
SPG11-222ENST00000560435 PAPOLAP51003 745 aaKnown RBP2.19□□□□□ -2.06
SPG11-222ENST00000560435 GSCP56915 257 aaPredicted RBP2.19□□□□□ -2.06
SPG11-222ENST00000560435 HUNKP57058 714 aa2.19□□□□□ -2.06
SPG11-222ENST00000560435 DRAP1Q14919 205 aaPredicted RBP2.19□□□□□ -2.06
SPG11-222ENST00000560435 ANKRD45Q5TZF3 282 aa2.19□□□□□ -2.06
SPG11-222ENST00000560435 PTOV1Q86YD1 416 aa2.19□□□□□ -2.06
SPG11-222ENST00000560435 C2CD5Q86YS7 1000 aa2.19□□□□□ -2.06
SPG11-222ENST00000560435 RAB42Q8N4Z0 105 aa2.19□□□□□ -2.06
SPG11-222ENST00000560435 PAF1Q8N7H5 531 aa2.19□□□□□ -2.06
SPG11-222ENST00000560435 IGSF8Q969P0 613 aa2.19□□□□□ -2.06
SPG11-222ENST00000560435 RFT1Q96AA3 541 aa2.19□□□□□ -2.06
SPG11-222ENST00000560435 HARBI1Q96MB7 349 aa2.19□□□□□ -2.06
SPG11-222ENST00000560435 LINC00167Q96N53 147 aa2.19□□□□□ -2.06
SPG11-222ENST00000560435 LBHD1Q9BQE6 289 aaPredicted RBP2.19□□□□□ -2.06
SPG11-222ENST00000560435 WWTR1Q9GZV5 400 aa2.19□□□□□ -2.06
SPG11-222ENST00000560435 FLRT3Q9NZU0 649 aa2.19□□□□□ -2.06
SPG11-222ENST00000560435 STK39Q9UEW8 545 aa2.19□□□□□ -2.06
SPG11-222ENST00000560435 TUBE1Q9UJT0 475 aa2.19□□□□□ -2.06
SPG11-222ENST00000560435 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
SPG11-222ENST00000560435 TEX13CA0A0J9YWL9 993 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 GUCY1B2O75343 617 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 NXPH2O95156 264 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 BMP10O95393 424 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 CLDN1O95832 211 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 HTR3AP46098 478 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 CTSCP53634 463 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 PAX8Q06710 450 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 GPR17Q13304 367 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 EIF4EBP2Q13542 120 aaPredicted RBP2.18□□□□□ -2.06
SPG11-222ENST00000560435 EFR3AQ14156 821 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 FGFBP1Q14512 234 aa2.18□□□□□ -2.06
SPG11-222ENST00000560435 PNLIPRP3Q17RR3 467 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms