RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 TFDP3Q5H9I0 405 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 TEX35Q5T0J7 233 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 CPZQ66K79 652 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 SLC6A19Q695T7 634 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 DPPA4Q7L190 304 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 MAATS1Q7Z4T9 603 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 SLC9B2Q86UD5 537 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 NLRP14Q86W24 1093 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 CAMK1DQ8IU85 385 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 PRELID2Q8N945 189 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 FAM172AQ8WUF8 416 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMAD3-215ENST00000560424 NTAN1Q96AB6 310 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 VOPP1Q96AW1 172 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 FAF2Q96CS3 445 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 OR6C1Q96RD1 312 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 FRMD8Q9BZ67 464 aaPredicted RBP9.19□□□□□ -0.94
SMAD3-215ENST00000560424 OSBPL8Q9BZF1 889 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 EPB41L1Q9H4G0 881 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 ANKZF1Q9H8Y5 726 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 SARS2Q9NP81 518 aaKnown RBP9.19□□□□□ -0.94
SMAD3-215ENST00000560424 PCYOX1Q9UHG3 505 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 ITPR3Q14573 2671 aa9.19□□□□□ -0.94
SMAD3-215ENST00000560424 hCG_1818297A0A087WSY0 165 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 CCDC151A5D8V7 595 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 FAM187AA6NFU0 413 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 PHF2O75151 1096 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 LRIG2O94898 1065 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 TJP3O95049 919 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 CBX6O95503 412 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 IVLP07476 585 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 ANKRD34CP0C6C1 535 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 RARAP10276 462 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 KDELR1P24390 212 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 SEPHS1P49903 392 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 YBEYP58557 167 aaPredicted RBP9.18□□□□□ -0.94
SMAD3-215ENST00000560424 PDE1BQ01064 536 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 NRG1Q02297 640 aaPredicted RBP9.18□□□□□ -0.94
SMAD3-215ENST00000560424 C2orf54Q08AI8 447 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 RALGDSQ12967 914 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 DHX34Q14147 1143 aaKnown RBP9.18□□□□□ -0.94
SMAD3-215ENST00000560424 ZFHX3Q15911 3703 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 CCNG2Q16589 344 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 C15orf59Q2T9L4 293 aaPredicted RBP9.18□□□□□ -0.94
SMAD3-215ENST00000560424 ERMARDQ5T6L9 678 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 SP5Q6BEB4 398 aaPredicted RBP9.18□□□□□ -0.94
SMAD3-215ENST00000560424 TXNRD3NBQ6F5E7 133 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 C8orf74Q6P047 294 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 MFSD7Q6UXD7 560 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 SPOCD1Q6ZMY3 1216 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 BBS12Q6ZW61 710 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 MARK2Q7KZI7 788 aaKnown RBP9.18□□□□□ -0.94
SMAD3-215ENST00000560424 PPP1R3BQ86XI6 285 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 GALNT13Q8IUC8 556 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 MAP7D3Q8IWC1 876 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 SFRP1Q8N474 314 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 LZTR1Q8N653 840 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 CT55Q8WUE5 264 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 RAPGEF5Q92565 580 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 SNRNP40Q96DI7 357 aaKnown RBP9.18□□□□□ -0.94
SMAD3-215ENST00000560424 C19orf60Q96EN9 201 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 PEBP4Q96S96 227 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 ZNF670Q9BS34 389 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 TEX101Q9BY14 249 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 GPR87Q9BY21 358 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 LHX9Q9NQ69 397 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 SMARCAL1Q9NZC9 954 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 LHX3Q9UBR4 397 aa9.18□□□□□ -0.94
SMAD3-215ENST00000560424 FEZ2Q9UHY8 353 aaPredicted RBP9.18□□□□□ -0.94
SMAD3-215ENST00000560424 LRRD1A4D1F6 860 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 SPAG6O75602 509 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 FUCA1P04066 466 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 KRT1P04264 644 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 H2AFXP16104 143 aaPredicted RBP9.17□□□□□ -0.94
SMAD3-215ENST00000560424 EPHB2P29323 1055 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 ADRA1BP35368 520 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 SSR1P43307 286 aaKnown RBP9.17□□□□□ -0.94
SMAD3-215ENST00000560424 GPR1P46091 355 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 POLD2P49005 469 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 DRG2P55039 364 aaKnown RBP9.17□□□□□ -0.94
SMAD3-215ENST00000560424 LRP8Q14114 963 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 BRD3Q15059 726 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 CYTH1Q15438 398 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 PARP15Q460N3 678 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 ATP13A4Q4VNC1 1196 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.17□□□□□ -0.94
SMAD3-215ENST00000560424 MANEALQ5VSG8 457 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 AFMIDQ63HM1 303 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 AADACL2Q6P093 401 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 SYDE1Q6ZW31 735 aaPredicted RBP9.17□□□□□ -0.94
SMAD3-215ENST00000560424 GDF7Q7Z4P5 450 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 MTERF4Q7Z6M4 381 aaKnown RBP9.17□□□□□ -0.94
SMAD3-215ENST00000560424 SRLQ86TD4 932 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 SYVN1Q86TM6 617 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 ZSWIM9Q86XI8 627 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 PELI3Q8N2H9 469 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 CISD2Q8N5K1 135 aaKnown RBP9.17□□□□□ -0.94
SMAD3-215ENST00000560424 RTL3Q8N8U3 475 aaKnown RBP9.17□□□□□ -0.94
SMAD3-215ENST00000560424 Q8NA96 180 aa9.17□□□□□ -0.94
SMAD3-215ENST00000560424 AVL9Q8NBF6 648 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms