RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 FASTKD1Q53R41 847 aaKnown RBP19.98■□□□□ 0.79
TSPAN3-207ENST00000559494 IGDCC3Q8IVU1 814 aa19.98■□□□□ 0.79
TSPAN3-207ENST00000559494 MMGT1Q8N4V1 131 aa19.98■□□□□ 0.79
TSPAN3-207ENST00000559494 BEND7Q8N7W2 519 aaPredicted RBP19.98■□□□□ 0.79
TSPAN3-207ENST00000559494 ARL10Q8N8L6 244 aa19.98■□□□□ 0.79
TSPAN3-207ENST00000559494 GRHL1Q9NZI5 618 aa19.98■□□□□ 0.79
TSPAN3-207ENST00000559494 WHRNQ9P202 907 aa19.98■□□□□ 0.79
TSPAN3-207ENST00000559494 TBC1D29Q9UFV1 150 aa19.98■□□□□ 0.79
TSPAN3-207ENST00000559494 PADI4Q9UM07 663 aa19.98■□□□□ 0.79
TSPAN3-207ENST00000559494 DNAJC16Q9Y2G8 782 aa19.98■□□□□ 0.79
TSPAN3-207ENST00000559494 DNMT3AQ9Y6K1 912 aaPredicted RBP19.98■□□□□ 0.79
TSPAN3-207ENST00000559494 PRSS21Q9Y6M0 314 aa19.98■□□□□ 0.79
TSPAN3-207ENST00000559494 ZCWPW2A0A1B0GU75 182 aa19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 CPED1A4D0V7 1026 aa19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 EME2A4GXA9 379 aaPredicted RBP19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 CFAP99D6REC4 459 aa19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 CD3EAPO15446 510 aaKnown RBP19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 RALBP11234 206 aa19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 DUSP3P51452 185 aaPredicted RBP19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 SLC7A5Q01650 507 aa19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 ITIH4Q14624 930 aa19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 TRADDQ15628 312 aa19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 INSCQ1MX18 579 aa19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 BCL7AQ4VC05 210 aa19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 KIAA0930Q6ICG6 404 aaPredicted RBP19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 GUSBP11Q6P575 273 aa19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 LDB1Q86U70 411 aaPredicted RBP19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 C17orf82Q86X59 251 aaPredicted RBP19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 NAGSQ8N159 534 aa19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 CLDN19Q8N6F1 224 aa19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 NOA1Q8NC60 698 aaKnown RBP19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 BBOF1Q8ND07 529 aa19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 MNS1Q8NEH6 495 aa19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 PATE1Q8WXA2 126 aa19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 ZNF669Q96BR6 464 aaPredicted RBP19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 STAMBPL1Q96FJ0 436 aa19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 ZNF514Q96K75 400 aaPredicted RBP19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 CATSPERZQ9NTU4 200 aa19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 NCKIPSDQ9NZQ3 722 aa19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 APOBEC2Q9Y235 224 aaKnown RBP19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 UTP11Q9Y3A2 253 aaKnown RBP19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 RPS6KL1Q9Y6S9 549 aa19.97■□□□□ 0.79
TSPAN3-207ENST00000559494 TRBV23OR9-2A0A075B6M9 112 aa19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 CTAGE15A4D2H0 777 aa19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 A6NCN8 305 aa19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 GOLGA8KD6RF30 607 aa19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 GOLGA8TH3BQL2 631 aa19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 OR1I1O60431 355 aa19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 CTAGE8P0CG41 777 aa19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 RPIAP49247 311 aa19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 HLTFQ14527 1009 aaKnown RBP eCLIP19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 SMAD1Q15797 465 aaKnown RBP19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 C14orf28Q4W4Y0 310 aa19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 CCDC157Q569K6 752 aa19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 DNAJC21Q5F1R6 531 aaKnown RBP19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 LYPLAL1Q5VWZ2 237 aa19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 CERS6Q6ZMG9 384 aa19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 CTAGE6Q86UF2 777 aa19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 AMZ2Q86W34 360 aa19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 CTAGE4Q8IX94 777 aa19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 PDIK1LQ8N165 341 aa19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 EBNA1BP2Q99848 306 aaKnown RBP19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 PRDM8Q9NQV8 689 aa19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 PCDHGA1Q9Y5H4 931 aa19.96■□□□□ 0.79
TSPAN3-207ENST00000559494 UNC13CQ8NB66 2214 aa19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 ESPNB1AK53 854 aa19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 SNX2O60749 519 aa19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 KCNJ13O60928 360 aa19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 USP1O94782 785 aa19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 PRLHRP49683 370 aa19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 MAZP56270 477 aaKnown RBP19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 ARL4CP56559 192 aa19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 HIF1AQ16665 826 aa19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 HP1BP3Q5SSJ5 553 aaPredicted RBP19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 PERM1Q5SV97 790 aa19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 C8orf74Q6P047 294 aa19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 IYDQ6PHW0 289 aa19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 PACS1Q6VY07 963 aa19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 EFL1Q7Z2Z2 1120 aaKnown RBP19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 ARL14Q8N4G2 192 aa19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 LINC00615Q96LM1 132 aaPredicted RBP19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 TTC1Q99614 292 aa19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 WDR83Q9BRX9 315 aaKnown RBP19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 RAB17Q9H0T7 212 aa19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 OSGEPL1Q9H4B0 414 aa19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 IL1RAPL1Q9NZN1 696 aa19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 FAM169AQ9Y6X4 670 aa19.95■□□□□ 0.78
TSPAN3-207ENST00000559494 MGAT4DA6NG13 374 aa19.94■□□□□ 0.78
TSPAN3-207ENST00000559494 NDC80O14777 642 aa19.94■□□□□ 0.78
TSPAN3-207ENST00000559494 ZNF500O60304 480 aaPredicted RBP19.94■□□□□ 0.78
TSPAN3-207ENST00000559494 RFPL3O75679 317 aa19.94■□□□□ 0.78
TSPAN3-207ENST00000559494 PGAM1P18669 254 aa19.94■□□□□ 0.78
TSPAN3-207ENST00000559494 PAMP19021 973 aa19.94■□□□□ 0.78
TSPAN3-207ENST00000559494 PBLDP30039 288 aaPredicted RBP19.94■□□□□ 0.78
TSPAN3-207ENST00000559494 ELK3P41970 407 aa19.94■□□□□ 0.78
TSPAN3-207ENST00000559494 NSG1P42857 185 aa19.94■□□□□ 0.78
TSPAN3-207ENST00000559494 DRG2P55039 364 aaKnown RBP19.94■□□□□ 0.78
TSPAN3-207ENST00000559494 DMPKQ09013 629 aa19.94■□□□□ 0.78
TSPAN3-207ENST00000559494 CALCOCO2Q13137 446 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms