RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 C1orf54Q8WWF1 131 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 ART4Q93070 314 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 SGF29Q96ES7 293 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 ASB8Q9H765 288 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 SARS2Q9NP81 518 aaKnown RBP12.32□□□□□ -0.44
SMAD3-208ENST00000558827 AKAP7Q9P0M2 348 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-208ENST00000558827 WDR37Q9Y2I8 494 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 SLC30A1Q9Y6M5 507 aa12.32□□□□□ -0.44
SMAD3-208ENST00000558827 C2orf81A6NN90 581 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 GOLGA6L6A8MZA4 724 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 MIF4GDA9UHW6 222 aaKnown RBP12.31□□□□□ -0.44
SMAD3-208ENST00000558827 ZW10O43264 779 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 EFSO43281 561 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 DUX1O43812 170 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 PRAMEF1O95521 474 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 ETS1P14921 441 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 AMD1P17707 334 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 IDSP22304 550 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 CDKN1CP49918 316 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-208ENST00000558827 GFERP55789 205 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 TMPRSS3P57727 454 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 SEPT6Q14141 434 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 NFE2L1Q14494 772 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 CLCA4Q14CN2 919 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 TAF1AQ15573 450 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-208ENST00000558827 DENND5AQ6IQ26 1287 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 CCDC81Q6ZN84 652 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 C11orf96Q7Z7L8 435 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 OR4D9Q8NGE8 314 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 HES6Q96HZ4 224 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 VPS35Q96QK1 796 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 DPH1Q9BZG8 443 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 STN1Q9H668 368 aaKnown RBP12.31□□□□□ -0.44
SMAD3-208ENST00000558827 LZTFL1Q9NQ48 299 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 SLC39A1Q9NY26 324 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.31□□□□□ -0.44
SMAD3-208ENST00000558827 AAR2Q9Y312 384 aaKnown RBP12.31□□□□□ -0.44
SMAD3-208ENST00000558827 B3GALT1Q9Y5Z6 326 aa12.31□□□□□ -0.44
SMAD3-208ENST00000558827 CFAP20Q9Y6A4 193 aaKnown RBP12.31□□□□□ -0.44
SMAD3-208ENST00000558827 SDK2Q58EX2 2172 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 LOC400499M0QZD8 3231 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 KIR2DS5A0A0G2JLQ3 304 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 A0A0G2JNG1 304 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 C5orf60A6NFR6 353 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 KIR2DS3K7RE56 304 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 NVLO15381 856 aaKnown RBP12.3□□□□□ -0.44
SMAD3-208ENST00000558827 POLBP06746 335 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 THRAP10827 490 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 SLC2A4P14672 509 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 MSH3P20585 1137 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 SEPHS1P49903 392 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 ARSDP51689 593 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 UBE2IP63279 158 aaKnown RBP12.3□□□□□ -0.44
SMAD3-208ENST00000558827 VAC14Q08AM6 782 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 KLF1Q13351 362 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-208ENST00000558827 MSLNQ13421 630 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-208ENST00000558827 POU6F1Q14863 301 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 KIR2DS5Q14953 304 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 TAF1BQ53T94 588 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-208ENST00000558827 LDLRAP1Q5SW96 308 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 ANKS6Q68DC2 871 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 DUS1LQ6P1R4 473 aaKnown RBP12.3□□□□□ -0.44
SMAD3-208ENST00000558827 AMZ2Q86W34 360 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 TXLNBQ8N3L3 684 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 TTC13Q8NBP0 860 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 AGBL5Q8NDL9 886 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 SH3KBP1Q96B97 665 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 CXorf40BQ96DE9 158 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 DNAJC1Q96KC8 554 aaKnown RBP12.3□□□□□ -0.44
SMAD3-208ENST00000558827 TGM7Q96PF1 710 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 TIMM29Q9BSF4 260 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 OGFRQ9NZT2 677 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 PCDHGA7Q9Y5G6 932 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 PIEZO2Q9H5I5 2752 aa12.3□□□□□ -0.44
SMAD3-208ENST00000558827 OR5K4A6NMS3 321 aa12.29□□□□□ -0.44
SMAD3-208ENST00000558827 KIF1CO43896 1103 aaKnown RBP12.29□□□□□ -0.44
SMAD3-208ENST00000558827 SRP72O76094 671 aaKnown RBP12.29□□□□□ -0.44
SMAD3-208ENST00000558827 IFNB1P01574 187 aa12.29□□□□□ -0.44
SMAD3-208ENST00000558827 WT1P19544 449 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-208ENST00000558827 LEPRP48357 1165 aaKnown RBP12.29□□□□□ -0.44
SMAD3-208ENST00000558827 CLCNKAP51800 687 aa12.29□□□□□ -0.44
SMAD3-208ENST00000558827 CYP4F2P78329 520 aa12.29□□□□□ -0.44
SMAD3-208ENST00000558827 GPLD1P80108 840 aa12.29□□□□□ -0.44
SMAD3-208ENST00000558827 XIAPP98170 497 aa12.29□□□□□ -0.44
SMAD3-208ENST00000558827 ITGA9Q13797 1035 aa12.29□□□□□ -0.44
SMAD3-208ENST00000558827 PARP6Q2NL67 630 aa12.29□□□□□ -0.44
SMAD3-208ENST00000558827 CCDC38Q502W7 563 aa12.29□□□□□ -0.44
SMAD3-208ENST00000558827 ZRANB3Q5FWF4 1079 aa12.29□□□□□ -0.44
SMAD3-208ENST00000558827 SEL1L2Q5TEA6 688 aa12.29□□□□□ -0.44
SMAD3-208ENST00000558827 TMEM26Q6ZUK4 368 aa12.29□□□□□ -0.44
SMAD3-208ENST00000558827 TAS2R42Q7RTR8 314 aa12.29□□□□□ -0.44
SMAD3-208ENST00000558827 LILRA3Q8N6C8 439 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-208ENST00000558827 GPR150Q8NGU9 434 aa12.29□□□□□ -0.44
SMAD3-208ENST00000558827 SLC35B2Q8TB61 432 aa12.29□□□□□ -0.44
SMAD3-208ENST00000558827 BRSK1Q8TDC3 778 aa12.29□□□□□ -0.44
SMAD3-208ENST00000558827 SLC39A7Q92504 469 aa12.29□□□□□ -0.44
SMAD3-208ENST00000558827 RSC1A1Q92681 617 aa12.29□□□□□ -0.44
SMAD3-208ENST00000558827 TAAR9Q96RI9 348 aa12.29□□□□□ -0.44
SMAD3-208ENST00000558827 UBL7Q96S82 380 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-208ENST00000558827 CCNL2Q96S94 520 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms