RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 FAM237BA0A1B0GVD1 139 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 MAGEB16A2A368 324 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 CD3EAPO15446 510 aaKnown RBP14.12□□□□□ -0.15
USP3-205ENST00000557884 SGTAO43765 313 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 NOBOXO60393 691 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 OR1I1O60431 355 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 POP7O75817 140 aaKnown RBP14.12□□□□□ -0.15
USP3-205ENST00000557884 EML2O95834 649 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 CKMT1AP12532 417 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 ATP1B2P14415 290 aaPredicted RBP14.12□□□□□ -0.15
USP3-205ENST00000557884 ACADVLP49748 655 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 MAZP56270 477 aaKnown RBP14.12□□□□□ -0.15
USP3-205ENST00000557884 ARL4CP56559 192 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 CALCOCO2Q13137 446 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 TRADDQ15628 312 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 SEPT7Q16181 437 aaKnown RBP14.12□□□□□ -0.15
USP3-205ENST00000557884 HIF1AQ16665 826 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 N4BP2L1Q5TBK1 243 aaPredicted RBP14.12□□□□□ -0.15
USP3-205ENST00000557884 KIAA0930Q6ICG6 404 aaPredicted RBP14.12□□□□□ -0.15
USP3-205ENST00000557884 EFL1Q7Z2Z2 1120 aaKnown RBP14.12□□□□□ -0.15
USP3-205ENST00000557884 C11orf96Q7Z7L8 435 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 IGDCC3Q8IVU1 814 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 PDIK1LQ8N165 341 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 CLDN19Q8N6F1 224 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 TIMM29Q9BSF4 260 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 CARD6Q9BX69 1037 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 RAB17Q9H0T7 212 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 GRHL1Q9NZI5 618 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 TBC1D29Q9UFV1 150 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 PRSS21Q9Y6M0 314 aa14.12□□□□□ -0.15
USP3-205ENST00000557884 ESYT3A0FGR9 886 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 SMAPO00193 183 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 PGAM1P18669 254 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 PAMP19021 973 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 ARCN1P48444 511 aaKnown RBP14.11□□□□□ -0.15
USP3-205ENST00000557884 RPIAP49247 311 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 DUSP3P51452 185 aaPredicted RBP14.11□□□□□ -0.15
USP3-205ENST00000557884 BCL7AQ4VC05 210 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 LYPLAL1Q5VWZ2 237 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 OGFOD3Q6PK18 319 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 AMZ2Q86W34 360 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 ANKMY2Q8IV38 441 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 MMGT1Q8N4V1 131 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 BBOF1Q8ND07 529 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 GPR156Q8NFN8 814 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 IFI44Q8TCB0 444 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 HEXDCQ8WVB3 486 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 CFAP36Q96G28 342 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 ZNF514Q96K75 400 aaPredicted RBP14.11□□□□□ -0.15
USP3-205ENST00000557884 EBNA1BP2Q99848 306 aaKnown RBP14.11□□□□□ -0.15
USP3-205ENST00000557884 PRDM8Q9NQV8 689 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 NCKIPSDQ9NZQ3 722 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 WHRNQ9P202 907 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 PADI4Q9UM07 663 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 CHMP2BQ9UQN3 213 aa14.11□□□□□ -0.15
USP3-205ENST00000557884 APOBEC2Q9Y235 224 aaKnown RBP14.11□□□□□ -0.15
USP3-205ENST00000557884 LRP4O75096 1905 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 ZCWPW2A0A1B0GU75 182 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 PDZK1P1A8MUH7 402 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 NDC80O14777 642 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 RFPL3O75679 317 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 F7P08709 466 aaPredicted RBP14.1□□□□□ -0.15
USP3-205ENST00000557884 VCLP18206 1134 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 ACP1P24666 158 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 PMLP29590 882 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 ELK3P41970 407 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 NSG1P42857 185 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 PLTPP55058 493 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 NFE2L1Q14494 772 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 ITIH4Q14624 930 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 CRYMQ14894 314 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 C14orf28Q4W4Y0 310 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 AARS2Q5JTZ9 985 aaKnown RBP14.1□□□□□ -0.15
USP3-205ENST00000557884 PERM1Q5SV97 790 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 ARMC3Q5W041 872 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 CERS6Q6ZMG9 384 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 FAM83HQ6ZRV2 1179 aaPredicted RBP14.1□□□□□ -0.15
USP3-205ENST00000557884 TMEM135Q86UB9 458 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 UNC5BQ8IZJ1 945 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 NAGSQ8N159 534 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 CEP112Q8N8E3 955 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 SGSM3Q96HU1 749 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 TTC1Q99614 292 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 WDR83Q9BRX9 315 aaKnown RBP14.1□□□□□ -0.15
USP3-205ENST00000557884 C20orf96Q9NUD7 363 aaPredicted RBP14.1□□□□□ -0.15
USP3-205ENST00000557884 EVA1BQ9NVM1 165 aa14.1□□□□□ -0.15
USP3-205ENST00000557884 TDRD6O60522 2096 aaKnown RBP14.1□□□□□ -0.15
USP3-205ENST00000557884 CACNA1AO00555 2505 aa14.09□□□□□ -0.15
USP3-205ENST00000557884 ABCB7O75027 752 aa14.09□□□□□ -0.15
USP3-205ENST00000557884 NDUFS3O75489 264 aa14.09□□□□□ -0.15
USP3-205ENST00000557884 USP1O94782 785 aa14.09□□□□□ -0.15
USP3-205ENST00000557884 POLBP06746 335 aa14.09□□□□□ -0.15
USP3-205ENST00000557884 ITGB6P18564 788 aa14.09□□□□□ -0.15
USP3-205ENST00000557884 RPL10P27635 214 aaKnown RBP14.09□□□□□ -0.15
USP3-205ENST00000557884 DEKP35659 375 aaKnown RBP14.09□□□□□ -0.15
USP3-205ENST00000557884 TTPAP49638 278 aa14.09□□□□□ -0.15
USP3-205ENST00000557884 PRLHRP49683 370 aa14.09□□□□□ -0.15
USP3-205ENST00000557884 DRG2P55039 364 aaKnown RBP14.09□□□□□ -0.15
USP3-205ENST00000557884 CLDN6P56747 220 aa14.09□□□□□ -0.15
USP3-205ENST00000557884 GUCY2DQ02846 1103 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms