RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 FAM151BQ6UXP7 276 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 RBM12BQ8IXT5 1001 aaKnown RBP14.39□□□□□ -0.11
SHMT2-235ENST00000557740 ZNF567Q8N184 647 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 TTC30BQ8N4P2 665 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 BRSK1Q8TDC3 778 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 OXNAD1Q96HP4 312 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-235ENST00000557740 SLC45A3Q96JT2 553 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 MRGPRX2Q96LB1 330 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 C9orf72Q96LT7 481 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 TGM7Q96PF1 710 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 FCRL5Q96RD9 977 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 FERMT1Q9BQL6 677 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 TRIM5Q9C035 493 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 IL26Q9NPH9 171 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 STARD5Q9NSY2 213 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.39□□□□□ -0.11
SHMT2-235ENST00000557740 OGFRQ9NZT2 677 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 ZNF624Q9P2J8 865 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-235ENST00000557740 TRIM10Q9UDY6 481 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 RSPH14Q9UHP6 348 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 TMPRSS11EQ9UL52 423 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 PKP3Q9Y446 797 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 SLC30A1Q9Y6M5 507 aa14.39□□□□□ -0.11
SHMT2-235ENST00000557740 GLYATL1P3A0A0U1RQE8 302 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 MACROD2A1Z1Q3 448 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 OR52A4PA6NMU1 304 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 TOX3O15405 576 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-235ENST00000557740 BRAFP15056 766 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 MARCKSL1P49006 195 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 ADCY2Q08462 1091 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 ABHD18Q0P651 414 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 ITGA9Q13797 1035 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 GPR18Q14330 331 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 SLC1A5Q15758 541 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 ABRAXAS1Q6UWZ7 409 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 WASH2PQ6VEQ5 465 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 DAAM2Q86T65 1068 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 ESX1Q8N693 406 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 TC2NQ8N9U0 490 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 CATSPER2Q96P56 530 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 ULBP3Q9BZM4 244 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 ADNPQ9H2P0 1102 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 WASH6PQ9NQA3 447 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 GEMIN8Q9NWZ8 242 aaKnown RBP14.38□□□□□ -0.11
SHMT2-235ENST00000557740 SIDT1Q9NXL6 827 aaKnown RBP14.38□□□□□ -0.11
SHMT2-235ENST00000557740 TRHDEQ9UKU6 1024 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 TMEM184BQ9Y519 407 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-235ENST00000557740 PCDHA13Q9Y5I0 950 aa14.38□□□□□ -0.11
SHMT2-235ENST00000557740 ASH1LQ9NR48 2969 aaKnown RBP14.38□□□□□ -0.11
SHMT2-235ENST00000557740 SETXQ7Z333 2677 aaKnown RBP14.38□□□□□ -0.11
SHMT2-235ENST00000557740 H7C0C1 242 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 APOC4-APOC2K7ER74 178 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 BUD23O43709 281 aaKnown RBP14.37□□□□□ -0.11
SHMT2-235ENST00000557740 KCNJ13O60928 360 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 APOC2P02655 101 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 PRKAR1AP10644 381 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 ITGB6P18564 788 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 CYLC1P35663 651 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-235ENST00000557740 CCR10P46092 362 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 ATP5OP48047 213 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 LEPRP48357 1165 aaKnown RBP14.37□□□□□ -0.11
SHMT2-235ENST00000557740 SEPHS1P49903 392 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 GEMP55040 296 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 POLE2P56282 527 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 NFKB2Q00653 900 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 CHRNA6Q15825 494 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 ITPRIPL1Q6GPH6 555 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 IRGCQ6NXR0 463 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 SARM1Q6SZW1 724 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 ATG14Q6ZNE5 492 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 BBS12Q6ZW61 710 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 PRSS42Q7Z5A4 293 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 C11orf96Q7Z7L8 435 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 AMZ2Q86W34 360 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 CCDC170Q8IYT3 715 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 UNC5BQ8IZJ1 945 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 DDHD1Q8NEL9 900 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 DTX3LQ8TDB6 740 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 RSC1A1Q92681 617 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 ZDHHC12Q96GR4 267 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 HEMGNQ9BXL5 484 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 SPRY4Q9C004 299 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 TRIM4Q9C037 500 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 SLC25A18Q9H1K4 315 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 GBA3Q9H227 469 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 ZNF768Q9H5H4 540 aaKnown RBP14.37□□□□□ -0.11
SHMT2-235ENST00000557740 CLMPQ9H6B4 373 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 SLC40A1Q9NP59 571 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 IL17CQ9P0M4 197 aa14.37□□□□□ -0.11
SHMT2-235ENST00000557740 LOC101059948A0A1B0GTJ6 334 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 STX7O15400 261 aaKnown RBP14.36□□□□□ -0.11
SHMT2-235ENST00000557740 GPR39O43194 453 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 UGT1A9O60656 530 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 ANXA9O76027 345 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 STK10O94804 968 aaKnown RBP14.36□□□□□ -0.11
SHMT2-235ENST00000557740 WISP1O95388 367 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 LCA5LO95447 670 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 DLGAP3O95886 979 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 UGT1A6P19224 532 aa14.36□□□□□ -0.11
SHMT2-235ENST00000557740 MSH3P20585 1137 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms