RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 STX16-NPEPL1H3BU86 382 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 UBXN8O00124 270 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 STX16O14662 325 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 HDAC3O15379 428 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 KLK8O60259 260 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 LZTS3O60299 673 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-233ENST00000557529 ATP5HO75947 161 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 FTH1P02794 183 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 CHRNGP07510 517 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 ENO3P13929 434 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-233ENST00000557529 ITGB6P18564 788 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 C5AR1P21730 350 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 MPSTP25325 297 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 SERPINB3P29508 390 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 NTSR1P30989 418 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 P2RY2P41231 377 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 CORO7P57737 925 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 B4GALNT1Q00973 533 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 CNTN1Q12860 1018 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 BNIP1Q12981 228 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 STARD3Q14849 445 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 CST6Q15828 149 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 ZNF776Q68DI1 518 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-233ENST00000557529 ATG14Q6ZNE5 492 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 FRMD7Q6ZUT3 714 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 FRA10AC1Q70Z53 315 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 TRMT11Q7Z4G4 463 aaKnown RBP12.31□□□□□ -0.44
SHMT2-233ENST00000557529 MTDHQ86UE4 582 aaKnown RBP12.31□□□□□ -0.44
SHMT2-233ENST00000557529 OR2T3Q8NH03 318 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 LKAAEAR1Q8TD35 194 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 CXorf40AQ8TE69 158 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 GLYATL1Q969I3 302 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 NUS1Q96E22 293 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 TUBB6Q9BUF5 446 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 SAR1AQ9NR31 198 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 TXLNGQ9NUQ3 528 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 NUDT4Q9NZJ9 180 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 IKZF3Q9UKT9 509 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 SLC12A4Q9UP95 1085 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 FADS3Q9Y5Q0 445 aa12.31□□□□□ -0.44
SHMT2-233ENST00000557529 TCF20Q9UGU0 1960 aaKnown RBP12.31□□□□□ -0.44
SHMT2-233ENST00000557529 FADS2P1A8MWK0 482 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 MATN2O00339 956 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 ZNF195O14628 629 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 HGSO14964 777 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-233ENST00000557529 MBTPS2O43462 519 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 TSPAN6O43657 245 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 AP1G1O43747 822 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 SNX2O60749 519 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 RECQL5O94762 991 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-233ENST00000557529 SUPT7LO94864 414 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 S100BP04271 92 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-233ENST00000557529 C6P13671 934 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 GM2AP17900 193 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 DRD1P21728 446 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 TIE1P35590 1138 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 WASP42768 502 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 SCTRP47872 440 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 IDH3AP50213 366 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 ALDH18A1P54886 795 aaKnown RBP12.3□□□□□ -0.44
SHMT2-233ENST00000557529 SEC13P55735 322 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 SATB1Q01826 763 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 DPTQ07507 201 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 GRSF1Q12849 480 aaKnown RBP eCLIP12.3□□□□□ -0.44
SHMT2-233ENST00000557529 PFKFB4Q16877 469 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 HSF5Q4G112 596 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-233ENST00000557529 UNC50Q53HI1 259 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 PIP5KL1Q5T9C9 394 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 FAM91A1Q658Y4 838 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 SEL1L3Q68CR1 1132 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 EPGNQ6UW88 154 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 CLNKQ7Z7G1 428 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 PHYKPLQ8IUZ5 450 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 GABRG3Q99928 467 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 C1QTNF3Q9BXJ4 246 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 FAM126AQ9BYI3 521 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-233ENST00000557529 ZCCHC2Q9C0B9 1178 aaKnown RBP12.3□□□□□ -0.44
SHMT2-233ENST00000557529 GSTO2Q9H4Y5 243 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 UBE2ZQ9H832 354 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-233ENST00000557529 COG4Q9H9E3 785 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 ZDHHC4Q9NPG8 344 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 CD274Q9NZQ7 290 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 SORCS3Q9UPU3 1222 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 PIAS3Q9Y6X2 628 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 PLXNA2O75051 1894 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 TRPC5OSA6NMA1 111 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 PLK4O00444 970 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 FCHO1O14526 889 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 RAD51BO15315 384 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 MID1O15344 667 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 HNRNPCL1O60812 293 aaKnown RBP12.3□□□□□ -0.44
SHMT2-233ENST00000557529 DIAPH2O60879 1101 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 MMP20O60882 483 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 SERPINA6P08185 405 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 GLULP15104 373 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 AOAHP28039 575 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 CCR10P46092 362 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 ACTN3Q08043 901 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-233ENST00000557529 TBCCQ15814 346 aa12.3□□□□□ -0.44
SHMT2-233ENST00000557529 ACSBG2Q5FVE4 666 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms