RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 TRAPPC5Q8IUR0 188 aa13.83□□□□□ -0.2
SLIRP-210ENST00000557431 PLD5Q8N7P1 536 aa13.83□□□□□ -0.2
SLIRP-210ENST00000557431 CXorf40BQ96DE9 158 aa13.83□□□□□ -0.2
SLIRP-210ENST00000557431 RNF157Q96PX1 679 aa13.83□□□□□ -0.2
SLIRP-210ENST00000557431 ZSCAN5AQ9BUG6 496 aa13.83□□□□□ -0.2
SLIRP-210ENST00000557431 ACTL8Q9H568 366 aa13.83□□□□□ -0.2
SLIRP-210ENST00000557431 LRRC4CQ9HCJ2 640 aa13.83□□□□□ -0.2
SLIRP-210ENST00000557431 LHX9Q9NQ69 397 aa13.83□□□□□ -0.2
SLIRP-210ENST00000557431 LUZP4Q9P127 313 aa13.83□□□□□ -0.2
SLIRP-210ENST00000557431 AMACRQ9UHK6 382 aa13.83□□□□□ -0.2
SLIRP-210ENST00000557431 DOCK10Q96BY6 2186 aa13.83□□□□□ -0.2
SLIRP-210ENST00000557431 SMTNL1A8MU46 457 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 KMOO15229 486 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 CDK14O94921 469 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 SERPING1P05155 500 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 FGF5P12034 268 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 PBLDP30039 288 aaPredicted RBP13.82□□□□□ -0.2
SLIRP-210ENST00000557431 ARCN1P48444 511 aaKnown RBP13.82□□□□□ -0.2
SLIRP-210ENST00000557431 CD97P48960 835 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 PMS2P54278 862 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 IFI35P80217 286 aaPredicted RBP13.82□□□□□ -0.2
SLIRP-210ENST00000557431 PPIDQ08752 370 aaKnown RBP13.82□□□□□ -0.2
SLIRP-210ENST00000557431 TUBB3Q13509 450 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 IL10RAQ13651 578 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 IQCB1Q15051 598 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 PDK2Q15119 407 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 ATP13A5Q4VNC0 1218 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 C4orf17Q53FE4 359 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 PRR30Q53SZ7 412 aaPredicted RBP13.82□□□□□ -0.2
SLIRP-210ENST00000557431 DUS1LQ6P1R4 473 aaKnown RBP13.82□□□□□ -0.2
SLIRP-210ENST00000557431 ABRAXAS1Q6UWZ7 409 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 FAM83HQ6ZRV2 1179 aaPredicted RBP13.82□□□□□ -0.2
SLIRP-210ENST00000557431 PRSS42Q7Z5A4 293 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 ATCAYQ86WG3 371 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 PPP1R3BQ86XI6 285 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 RAVER1Q8IY67 606 aaKnown RBP13.82□□□□□ -0.2
SLIRP-210ENST00000557431 GDAP1Q8TB36 358 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 KLHL6Q8WZ60 621 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 FATE1Q969F0 183 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 PPM1MQ96MI6 270 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 MAP3K3Q99759 626 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 BPIFA3Q9BQP9 254 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 TIMM29Q9BSF4 260 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 ADGRE3Q9BY15 652 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 NAT10Q9H0A0 1025 aaKnown RBP13.82□□□□□ -0.2
SLIRP-210ENST00000557431 UCK1Q9HA47 277 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 SLC40A1Q9NP59 571 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 POT1Q9NUX5 634 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 FAM8A1Q9UBU6 413 aa13.82□□□□□ -0.2
SLIRP-210ENST00000557431 CFAP20Q9Y6A4 193 aaKnown RBP13.82□□□□□ -0.2
SLIRP-210ENST00000557431 LRRD1A4D1F6 860 aa13.81□□□□□ -0.2
SLIRP-210ENST00000557431 RGSL1A5PLK6 1076 aa13.81□□□□□ -0.2
SLIRP-210ENST00000557431 ARGFXA6NJG6 315 aa13.81□□□□□ -0.2
SLIRP-210ENST00000557431 TTLL8A6PVC2 850 aa13.81□□□□□ -0.2
SLIRP-210ENST00000557431 BUD23O43709 281 aaKnown RBP13.81□□□□□ -0.2
SLIRP-210ENST00000557431 PMPCBO75439 489 aa13.81□□□□□ -0.2
SLIRP-210ENST00000557431 MBD3O95983 291 aa13.81□□□□□ -0.2
SLIRP-210ENST00000557431 NELFEP18615 380 aaKnown RBP13.81□□□□□ -0.2
SLIRP-210ENST00000557431 MX2P20592 715 aa13.81□□□□□ -0.2
SLIRP-210ENST00000557431 IDSP22304 550 aa13.81□□□□□ -0.2
SLIRP-210ENST00000557431 PBX1P40424 430 aa13.81□□□□□ -0.2
SLIRP-210ENST00000557431 CTSCP53634 463 aa13.81□□□□□ -0.2
SLIRP-210ENST00000557431 DCDC1P59894 354 aa13.81□□□□□ -0.2
SLIRP-210ENST00000557431 DYNLT1P63172 113 aa13.81□□□□□ -0.2
SLIRP-210ENST00000557431 LLGL1Q15334 1064 aa13.81□□□□□ -0.2
SLIRP-210ENST00000557431 PRAMEF17Q5VTA0 474 aa13.81□□□□□ -0.2
SLIRP-210ENST00000557431 NT5DC3Q86UY8 548 aa13.81□□□□□ -0.2
SLIRP-210ENST00000557431 AVL9Q8NBF6 648 aa13.81□□□□□ -0.2
SLIRP-210ENST00000557431 SIDT2Q8NBJ9 832 aaKnown RBP13.81□□□□□ -0.2
SLIRP-210ENST00000557431 IMP4Q96G21 291 aaKnown RBP13.81□□□□□ -0.2
SLIRP-210ENST00000557431 PADI1Q9ULC6 663 aa13.81□□□□□ -0.2
SLIRP-210ENST00000557431 NENFQ9UMX5 172 aa13.81□□□□□ -0.2
SLIRP-210ENST00000557431 OR2AG2A6NM03 316 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 UGT1A9O60656 530 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 CCNYL3P0C7X3 344 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 TNNT1P13805 278 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 UGT1A6P19224 532 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 UGT1A1P22309 533 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 UGT1A4P22310 534 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 CHRNA4P43681 627 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 CCL11P51671 97 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 FANCCQ00597 558 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 CDK18Q07002 472 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 TMEM115Q12893 351 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-210ENST00000557431 SEMA5AQ13591 1074 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 NFE2L1Q14494 772 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 IL11RAQ14626 422 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 MESDQ14696 234 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 GPR19Q15760 415 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.8□□□□□ -0.2
SLIRP-210ENST00000557431 FIGNQ5HY92 759 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 CAPRIN2Q6IMN6 1127 aaKnown RBP13.8□□□□□ -0.2
SLIRP-210ENST00000557431 MICALCLQ6ZW33 695 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 BEND7Q8N7W2 519 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-210ENST00000557431 CPT1CQ8TCG5 803 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 ZNF830Q96NB3 372 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-210ENST00000557431 UGT1A7Q9HAW7 530 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 UGT1A10Q9HAW8 530 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 UGT1A8Q9HAW9 530 aa13.8□□□□□ -0.2
SLIRP-210ENST00000557431 MAGEE1Q9HCI5 957 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms