RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 WASH2PQ6VEQ5 465 aa22.49■■□□□ 1.19
TDP1-216ENST00000556867 NLRP9Q7RTR0 991 aa22.49■■□□□ 1.19
TDP1-216ENST00000556867 AMZ2Q86W34 360 aa22.49■■□□□ 1.19
TDP1-216ENST00000556867 AVL9Q8NBF6 648 aa22.49■■□□□ 1.19
TDP1-216ENST00000556867 OR13J1Q8NGT2 312 aa22.49■■□□□ 1.19
TDP1-216ENST00000556867 PEX13Q92968 403 aa22.49■■□□□ 1.19
TDP1-216ENST00000556867 DCUN1D1Q96GG9 259 aa22.49■■□□□ 1.19
TDP1-216ENST00000556867 COPS8Q99627 209 aa22.49■■□□□ 1.19
TDP1-216ENST00000556867 FAM96AQ9H5X1 160 aa22.49■■□□□ 1.19
TDP1-216ENST00000556867 WASH6PQ9NQA3 447 aa22.49■■□□□ 1.19
TDP1-216ENST00000556867 NEU2Q9Y3R4 380 aa22.49■■□□□ 1.19
TDP1-216ENST00000556867 TCAF1Q9Y4C2 921 aa22.49■■□□□ 1.19
TDP1-216ENST00000556867 WDFY3Q8IZQ1 3526 aa22.49■■□□□ 1.19
TDP1-216ENST00000556867 TRBV23OR9-2A0A075B6M9 112 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 CFAP99D6REC4 459 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 B4GAT1O43505 415 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 POP7O75817 140 aaKnown RBP22.48■■□□□ 1.19
TDP1-216ENST00000556867 RALBP11234 206 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 IDSP22304 550 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 ACRV1P26436 265 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 VPS41P49754 854 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 CDKN1CP49918 316 aaPredicted RBP22.48■■□□□ 1.19
TDP1-216ENST00000556867 OR1D5P58170 312 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 HHEXQ03014 270 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 ACVR1Q04771 509 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 KCNJ11Q14654 390 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 CLPPQ16740 277 aaPredicted RBP22.48■■□□□ 1.19
TDP1-216ENST00000556867 KCTD19Q17RG1 926 aaPredicted RBP22.48■■□□□ 1.19
TDP1-216ENST00000556867 FNBP1LQ5T0N5 605 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 AGAP9Q5VTM2 703 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 ABRAXAS1Q6UWZ7 409 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 MICALCLQ6ZW33 695 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 DET1Q7L5Y6 550 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 SLC9B2Q86UD5 537 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 PPHLN1Q8NEY8 458 aaKnown RBP22.48■■□□□ 1.19
TDP1-216ENST00000556867 MDM1Q8TC05 714 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 GRK7Q8WTQ7 553 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 SGF29Q96ES7 293 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 STN1Q9H668 368 aaKnown RBP22.48■■□□□ 1.19
TDP1-216ENST00000556867 ZDHHC3Q9NYG2 299 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 PIKFYVEQ9Y2I7 2098 aa22.48■■□□□ 1.19
TDP1-216ENST00000556867 CTAGE9A4FU28 777 aa22.47■■□□□ 1.19
TDP1-216ENST00000556867 KLHL33A6NCF5 533 aa22.47■■□□□ 1.19
TDP1-216ENST00000556867 SGTAO43765 313 aa22.47■■□□□ 1.19
TDP1-216ENST00000556867 ALDH4A1P30038 563 aa22.47■■□□□ 1.19
TDP1-216ENST00000556867 UBE2IP63279 158 aaKnown RBP22.47■■□□□ 1.19
TDP1-216ENST00000556867 CYP4F3Q08477 520 aa22.47■■□□□ 1.19
TDP1-216ENST00000556867 ST3GAL2Q16842 350 aa22.47■■□□□ 1.19
TDP1-216ENST00000556867 PCID2Q5JVF3 399 aa22.47■■□□□ 1.19
TDP1-216ENST00000556867 ZNF534Q76KX8 674 aa22.47■■□□□ 1.19
TDP1-216ENST00000556867 SERPINA9Q86WD7 417 aa22.47■■□□□ 1.19
TDP1-216ENST00000556867 PIANPQ8IYJ0 282 aa22.47■■□□□ 1.19
TDP1-216ENST00000556867 SH3KBP1Q96B97 665 aa22.47■■□□□ 1.19
TDP1-216ENST00000556867 CCDC97Q96F63 343 aaPredicted RBP22.47■■□□□ 1.19
TDP1-216ENST00000556867 ATXN7L3BQ96GX2 97 aa22.47■■□□□ 1.19
TDP1-216ENST00000556867 LINC00615Q96LM1 132 aaPredicted RBP22.47■■□□□ 1.19
TDP1-216ENST00000556867 ZNF778Q96MU6 729 aa22.47■■□□□ 1.19
TDP1-216ENST00000556867 IL22Q9GZX6 179 aa22.47■■□□□ 1.19
TDP1-216ENST00000556867 SCHIP1Q9P0W5 487 aaPredicted RBP22.47■■□□□ 1.19
TDP1-216ENST00000556867 SLC2A6Q9UGQ3 507 aa22.47■■□□□ 1.19
TDP1-216ENST00000556867 ATXN7L1Q9ULK2 861 aaPredicted RBP22.47■■□□□ 1.19
TDP1-216ENST00000556867 DMXL2Q8TDJ6 3036 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 TCRBV7S3A2A0A539 114 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 CCDC162PA2VCL2 907 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 PDZK1P1A8MUH7 402 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 TMX2-CTNND1H3BSU7 103 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 PRSS56P0CW18 603 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 BRAFP15056 766 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 CCKBRP32239 447 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 FOXN2P32314 431 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 NPY2RP49146 381 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 PRLHRP49683 370 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 SESN2P58004 480 aaPredicted RBP22.46■■□□□ 1.19
TDP1-216ENST00000556867 LRRC8BQ6P9F7 803 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 AFTPHQ6ULP2 937 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 TAS2R42Q7RTR8 314 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 B3GNT8Q7Z7M8 397 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 BEND7Q8N7W2 519 aaPredicted RBP22.46■■□□□ 1.19
TDP1-216ENST00000556867 HDAC10Q969S8 669 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 LIN37Q96GY3 246 aaPredicted RBP22.46■■□□□ 1.19
TDP1-216ENST00000556867 TMEM74Q96NL1 305 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 KCNK4Q9NYG8 393 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 BFARQ9NZS9 450 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 CPNE7Q9UBL6 633 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 SAR1BQ9Y6B6 198 aa22.46■■□□□ 1.19
TDP1-216ENST00000556867 ANKRD11Q6UB99 2663 aaPredicted RBP22.45■■□□□ 1.19
TDP1-216ENST00000556867 IGHV1OR21-1A0A087WYE8 117 aa22.45■■□□□ 1.18
TDP1-216ENST00000556867 MGAT4DA6NG13 374 aa22.45■■□□□ 1.18
TDP1-216ENST00000556867 CPNE6O95741 557 aa22.45■■□□□ 1.18
TDP1-216ENST00000556867 ATP1B2P14415 290 aaPredicted RBP22.45■■□□□ 1.18
TDP1-216ENST00000556867 XRCC1P18887 633 aaPredicted RBP22.45■■□□□ 1.18
TDP1-216ENST00000556867 RPL10P27635 214 aaKnown RBP22.45■■□□□ 1.18
TDP1-216ENST00000556867 CD1CP29017 333 aa22.45■■□□□ 1.18
TDP1-216ENST00000556867 INHBCP55103 352 aa22.45■■□□□ 1.18
TDP1-216ENST00000556867 GPLD1P80108 840 aa22.45■■□□□ 1.18
TDP1-216ENST00000556867 SQSTM1Q13501 440 aa22.45■■□□□ 1.18
TDP1-216ENST00000556867 SEPT7Q16181 437 aaKnown RBP22.45■■□□□ 1.18
TDP1-216ENST00000556867 DBN1Q16643 649 aa22.45■■□□□ 1.18
TDP1-216ENST00000556867 AMZ1Q400G9 498 aa22.45■■□□□ 1.18
TDP1-216ENST00000556867 MAP9Q49MG5 647 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms