RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 AAR2Q9Y312 384 aaKnown RBP10.17□□□□□ -0.78
SHMT2-224ENST00000556737 CACNA1GO43497 2377 aa10.17□□□□□ -0.78
SHMT2-224ENST00000556737 MGAQ8IWI9 3026 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 PRAMEF33A0A0G2JMD5 474 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 LILRA5A6NI73 299 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 C9orf172C9J069 976 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 AGRPO00253 132 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 HGSO14964 777 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-224ENST00000556737 STX7O15400 261 aaKnown RBP10.16□□□□□ -0.78
SHMT2-224ENST00000556737 SGTAO43765 313 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 DUX1O43812 170 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 PRAMEF10O60809 474 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 CDK14O94921 469 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 CCL4P13236 92 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 SLC2A4P14672 509 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 LPOP22079 712 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-224ENST00000556737 SLC5A2P31639 672 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 ARSDP51689 593 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 EPHA4P54764 986 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 DMPKQ09013 629 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 BIRC2Q13490 618 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 TRA2AQ13595 282 aaKnown RBP eCLIP10.16□□□□□ -0.78
SHMT2-224ENST00000556737 ITGA9Q13797 1035 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 SPARCL1Q14515 664 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 PRPSAP1Q14558 356 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 OASLQ15646 514 aaKnown RBP10.16□□□□□ -0.78
SHMT2-224ENST00000556737 SOWAHCQ53LP3 525 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-224ENST00000556737 LDLRAP1Q5SW96 308 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 MEI1Q5TIA1 1274 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 FAM83HQ6ZRV2 1179 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-224ENST00000556737 SLC9B2Q86UD5 537 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 TRAPPC5Q8IUR0 188 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 OR4K2Q8NGD2 314 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 OR13C4Q8NGS5 318 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 BRSK1Q8TDC3 778 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 PMEPA1Q969W9 287 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 CAPZA3Q96KX2 299 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 PPP1R2P1Q96PQ5 205 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 SLC38A3Q99624 504 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 DPH1Q9BZG8 443 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.16□□□□□ -0.78
SHMT2-224ENST00000556737 OGFRQ9NZT2 677 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 ZNF624Q9P2J8 865 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-224ENST00000556737 PDP2Q9P2J9 529 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 CPNE7Q9UBL6 633 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 DNAJC16Q9Y2G8 782 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 PKP3Q9Y446 797 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 SAR1BQ9Y6B6 198 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 ATMQ13315 3056 aa10.16□□□□□ -0.78
SHMT2-224ENST00000556737 SDK2Q58EX2 2172 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 MN1Q10571 1320 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-224ENST00000556737 BSNQ9UPA5 3926 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 OR5K4A6NMS3 321 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 C2orf81A6NN90 581 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 AGAP14A8MT82 685 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 NVLO15381 856 aaKnown RBP10.15□□□□□ -0.78
SHMT2-224ENST00000556737 KLK10O43240 276 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 ZW10O43264 779 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 LDB2O43679 373 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 LIASO43766 372 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 SRP72O76094 671 aaKnown RBP10.15□□□□□ -0.78
SHMT2-224ENST00000556737 AP2A1O95782 977 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 JMJD7P0C870 316 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 FGF3P11487 239 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-224ENST00000556737 XRCC1P18887 633 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-224ENST00000556737 MPSTP25325 297 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 CXCR5P32302 372 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 SLC19A1P41440 591 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 DRG2P55039 364 aaKnown RBP10.15□□□□□ -0.78
SHMT2-224ENST00000556737 TMPRSS3P57727 454 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 GTF2H3Q13889 308 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 SIX1Q15475 284 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-224ENST00000556737 SEPT7Q16181 437 aaKnown RBP10.15□□□□□ -0.78
SHMT2-224ENST00000556737 PARP6Q2NL67 630 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 SEL1L2Q5TEA6 688 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 AGAP9Q5VTM2 703 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 TMEM71Q6P5X7 295 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 WDR74Q6RFH5 385 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-224ENST00000556737 ABRAXAS1Q6UWZ7 409 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 WASH2PQ6VEQ5 465 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 ARHGEF18Q6ZSZ5 1173 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 SLC13A5Q86YT5 568 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-224ENST00000556737 JAMLQ86YT9 394 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 BMPERQ8N8U9 685 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 GPR150Q8NGU9 434 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 OR10G6Q8NH81 332 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 GDAP1Q8TB36 358 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 NAT14Q8WUY8 206 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 SNRNP27Q8WVK2 155 aaKnown RBP10.15□□□□□ -0.78
SHMT2-224ENST00000556737 CMKLR1Q99788 373 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 DPYSL5Q9BPU6 564 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 C19orf43Q9BQ61 176 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 TBC1D10AQ9BXI6 508 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 ZCCHC2Q9C0B9 1178 aaKnown RBP10.15□□□□□ -0.78
SHMT2-224ENST00000556737 STN1Q9H668 368 aaKnown RBP10.15□□□□□ -0.78
SHMT2-224ENST00000556737 UCK1Q9HA47 277 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 CPNE5Q9HCH3 593 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 WASH6PQ9NQA3 447 aa10.15□□□□□ -0.78
SHMT2-224ENST00000556737 FEZ2Q9UHY8 353 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-224ENST00000556737 WDR37Q9Y2I8 494 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms