RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 PRAMEF10O60809 474 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 KRT38O76015 456 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 C22orf31O95567 290 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 SNAI1O95863 264 aaPredicted RBP5.19□□□□□ -1.58
SRP54-211ENST00000556445 CLTAP09496 248 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 AXLP30530 894 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 GCH1P30793 250 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 CXCR5P32302 372 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 RFC1P35251 1148 aaPredicted RBP5.19□□□□□ -1.58
SRP54-211ENST00000556445 GARSP41250 739 aaKnown RBP5.19□□□□□ -1.58
SRP54-211ENST00000556445 SSR1P43307 286 aaKnown RBP5.19□□□□□ -1.58
SRP54-211ENST00000556445 ACOT2P49753 483 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 CPT1AP50416 773 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 SOX8P57073 446 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 SLC26A5P58743 744 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 CDR2Q01850 454 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 YWHAHQ04917 246 aaPredicted RBP5.19□□□□□ -1.58
SRP54-211ENST00000556445 DCTN2Q13561 401 aaKnown RBP5.19□□□□□ -1.58
SRP54-211ENST00000556445 LASP1Q14847 261 aaKnown RBP5.19□□□□□ -1.58
SRP54-211ENST00000556445 ZNF169Q14929 603 aaPredicted RBP5.19□□□□□ -1.58
SRP54-211ENST00000556445 MORF4L2Q15014 288 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 DCAF4L1Q3SXM0 396 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 KBTBD12Q3ZCT8 623 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 ZNF805Q5CZA5 627 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 ERMARDQ5T6L9 678 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 LIN9Q5TKA1 542 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 EMC10Q5UCC4 262 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 C11orf63Q6NUN7 778 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 RGMBQ6NW40 437 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 GJB7Q6PEY0 223 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 RAB11FIP2Q7L804 512 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 KRT73Q86Y46 540 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 FAM90A1Q86YD7 464 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 KRT222Q8N1A0 295 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 CFAP52Q8N1V2 620 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 METTL13Q8N6R0 699 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 UBL4BQ8N7F7 174 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 PDPRQ8NCN5 879 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 GABPB2Q8TAK5 448 aaPredicted RBP5.19□□□□□ -1.58
SRP54-211ENST00000556445 LNX1Q8TBB1 728 aaPredicted RBP5.19□□□□□ -1.58
SRP54-211ENST00000556445 ACTRT1Q8TDG2 376 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 TAS1R2Q8TE23 839 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 MAIP1Q8WWC4 291 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 SLC9A6Q92581 669 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 VPS39Q96JC1 886 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 VKORC1Q9BQB6 163 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 PARD6BQ9BYG5 372 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 GPR88Q9GZN0 384 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 PCDHAC1Q9H158 963 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 MRPL46Q9H2W6 279 aaKnown RBP5.19□□□□□ -1.58
SRP54-211ENST00000556445 MMADHCQ9H3L0 296 aaPredicted RBP5.19□□□□□ -1.58
SRP54-211ENST00000556445 PDE11AQ9HCR9 933 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 MID1IP1Q9NPA3 183 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 SLC35C2Q9NQQ7 365 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 ZDHHC7Q9NXF8 308 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 SELENONQ9NZV5 590 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 FOXJ2Q9P0K8 574 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 ZNF624Q9P2J8 865 aaPredicted RBP5.19□□□□□ -1.58
SRP54-211ENST00000556445 ANAPC5Q9UJX4 755 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 CPSF3Q9UKF6 684 aaKnown RBP5.19□□□□□ -1.58
SRP54-211ENST00000556445 TTC7AQ9ULT0 858 aaPredicted RBP5.19□□□□□ -1.58
SRP54-211ENST00000556445 ZMYND8Q9ULU4 1186 aaPredicted RBP5.19□□□□□ -1.58
SRP54-211ENST00000556445 ANGPTL3Q9Y5C1 460 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 V9GYY5 206 aaPredicted RBP5.19□□□□□ -1.58
SRP54-211ENST00000556445 EVPLQ92817 2033 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 NRCAMQ92823 1304 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 CNTNAP2Q9UHC6 1331 aa5.19□□□□□ -1.58
SRP54-211ENST00000556445 TRGV11A0A075B6L2 103 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 GOLGA6L10A0A0M3HER8 536 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 SMIM35A0A1B0GVV1 85 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 MBD3L4A6NDZ8 208 aaPredicted RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 MBD3L3A6NE82 208 aaPredicted RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 NPIPB15A6NHN6 443 aaPredicted RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 PRSS29PA6NIE9 313 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 C2orf81A6NN90 581 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 STX16-NPEPL1H3BU86 382 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 K7EPI3 171 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 PGRMC1O00264 195 aaKnown RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 STX16O14662 325 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 PCDH17O14917 1159 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 TP73O15350 636 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 MED7O43513 233 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 KLHL41O60662 606 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 SUN1O94901 812 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 ERLIN2O94905 339 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 OLFM2O95897 454 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 ASS1P00966 412 aaKnown RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 AHSGP02765 367 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 CYP1A2P05177 515 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 MMP3P08254 477 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 KRT5P13647 590 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 CYP11B1P15538 503 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 IL1R2P27930 398 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 TNFRSF8P28908 595 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 PBLDP30039 288 aaPredicted RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 GGT5P36269 586 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 CETN2P41208 172 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 SLC1A1P43005 524 aa5.18□□□□□ -1.58
SRP54-211ENST00000556445 NSFP46459 744 aaKnown RBP5.18□□□□□ -1.58
SRP54-211ENST00000556445 HARS2P49590 506 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms