RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 TTC30BQ8N4P2 665 aa15.18■□□□□ 0.02
SNX6-205ENST00000555648 NLGN4YQ8NFZ3 816 aaPredicted RBP15.18■□□□□ 0.02
SNX6-205ENST00000555648 PMEPA1Q969W9 287 aa15.18■□□□□ 0.02
SNX6-205ENST00000555648 OXNAD1Q96HP4 312 aaPredicted RBP15.18■□□□□ 0.02
SNX6-205ENST00000555648 TGM7Q96PF1 710 aa15.18■□□□□ 0.02
SNX6-205ENST00000555648 EFHD1Q9BUP0 239 aa15.18■□□□□ 0.02
SNX6-205ENST00000555648 FICDQ9BVA6 458 aa15.18■□□□□ 0.02
SNX6-205ENST00000555648 FAM117AQ9C073 453 aa15.18■□□□□ 0.02
SNX6-205ENST00000555648 GBA3Q9H227 469 aa15.18■□□□□ 0.02
SNX6-205ENST00000555648 IL17CQ9P0M4 197 aa15.18■□□□□ 0.02
SNX6-205ENST00000555648 SCHIP1Q9P0W5 487 aaPredicted RBP15.18■□□□□ 0.02
SNX6-205ENST00000555648 AAR2Q9Y312 384 aaKnown RBP15.18■□□□□ 0.02
SNX6-205ENST00000555648 ARHGEF17Q96PE2 2063 aaPredicted RBP15.17■□□□□ 0.02
SNX6-205ENST00000555648 CCDC66A2RUB6 948 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 SOWAHDA6NJG2 315 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 J3QKU1 62 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 CAPN5O15484 640 aaPredicted RBP15.17■□□□□ 0.02
SNX6-205ENST00000555648 BUD23O43709 281 aaKnown RBP15.17■□□□□ 0.02
SNX6-205ENST00000555648 UGT1A9O60656 530 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 ZNF189O75820 626 aaPredicted RBP15.17■□□□□ 0.02
SNX6-205ENST00000555648 TJP3O95049 919 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 UGT1A6P19224 532 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 MSH3P20585 1137 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 UGT1A1P22309 533 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 UGT1A4P22310 534 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 MAP4P27816 1152 aaKnown RBP15.17■□□□□ 0.02
SNX6-205ENST00000555648 CTNNA1P35221 906 aaKnown RBP15.17■□□□□ 0.02
SNX6-205ENST00000555648 ZNF75DP51815 510 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 EIF3EP60228 445 aaKnown RBP15.17■□□□□ 0.02
SNX6-205ENST00000555648 OTUD4Q01804 1114 aaKnown RBP15.17■□□□□ 0.02
SNX6-205ENST00000555648 LONRF2Q1L5Z9 754 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 KHDC1Q4VXA5 237 aaKnown RBP15.17■□□□□ 0.02
SNX6-205ENST00000555648 AGAP9Q5VTM2 703 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 ABRAXAS1Q6UWZ7 409 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 WASH2PQ6VEQ5 465 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 KIAA1328Q86T90 577 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 ZNF547Q8IVP9 402 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 TXLNBQ8N3L3 684 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 ACTL9Q8TC94 416 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 DTX3LQ8TDB6 740 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 RTP4Q96DX8 246 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 ZDHHC12Q96GR4 267 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 PPP1R2P1Q96PQ5 205 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 OSBPL8Q9BZF1 889 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 TRIT1Q9H3H1 467 aaKnown RBP15.17■□□□□ 0.02
SNX6-205ENST00000555648 GPN2Q9H9Y4 310 aaPredicted RBP15.17■□□□□ 0.02
SNX6-205ENST00000555648 UGT1A7Q9HAW7 530 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 UGT1A10Q9HAW8 530 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 UGT1A8Q9HAW9 530 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 WASH6PQ9NQA3 447 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 FBXO8Q9NRD0 319 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 ZNF624Q9P2J8 865 aaPredicted RBP15.17■□□□□ 0.02
SNX6-205ENST00000555648 EFR3BQ9Y2G0 817 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 PCDHA3Q9Y5H8 950 aa15.17■□□□□ 0.02
SNX6-205ENST00000555648 GOLGA6L9A6NEM1 432 aa15.16■□□□□ 0.02
SNX6-205ENST00000555648 OR52A4PA6NMU1 304 aa15.16■□□□□ 0.02
SNX6-205ENST00000555648 ZNF891A8MT65 544 aaPredicted RBP15.16■□□□□ 0.02
SNX6-205ENST00000555648 KCNN4O15554 427 aa15.16■□□□□ 0.02
SNX6-205ENST00000555648 POP7O75817 140 aaKnown RBP15.16■□□□□ 0.02
SNX6-205ENST00000555648 AGTP01019 485 aa15.16■□□□□ 0.02
SNX6-205ENST00000555648 LPOP22079 712 aaPredicted RBP15.16■□□□□ 0.02
SNX6-205ENST00000555648 PBLDP30039 288 aaPredicted RBP15.16■□□□□ 0.02
SNX6-205ENST00000555648 SEPHS1P49903 392 aa15.16■□□□□ 0.02
SNX6-205ENST00000555648 CYP4F2P78329 520 aa15.16■□□□□ 0.02
SNX6-205ENST00000555648 NFATC3Q12968 1075 aa15.16■□□□□ 0.02
SNX6-205ENST00000555648 KLHL35Q6PF15 583 aa15.16■□□□□ 0.02
SNX6-205ENST00000555648 TMEM220Q6QAJ8 160 aa15.16■□□□□ 0.02
SNX6-205ENST00000555648 BMPERQ8N8U9 685 aa15.16■□□□□ 0.02
SNX6-205ENST00000555648 ZNF398Q8TD17 642 aa15.16■□□□□ 0.02
SNX6-205ENST00000555648 DCUN1D1Q96GG9 259 aa15.16■□□□□ 0.02
SNX6-205ENST00000555648 MRFAP1L1Q96HT8 127 aa15.16■□□□□ 0.02
SNX6-205ENST00000555648 ZNF514Q96K75 400 aaPredicted RBP15.16■□□□□ 0.02
SNX6-205ENST00000555648 C9orf72Q96LT7 481 aa15.16■□□□□ 0.02
SNX6-205ENST00000555648 C10orf88Q9H8K7 445 aa15.16■□□□□ 0.02
SNX6-205ENST00000555648 DNMT3AQ9Y6K1 912 aaPredicted RBP15.16■□□□□ 0.02
SNX6-205ENST00000555648 BAHCC1Q9P281 2608 aa15.16■□□□□ 0.02
SNX6-205ENST00000555648 MN1Q10571 1320 aaPredicted RBP15.16■□□□□ 0.02
SNX6-205ENST00000555648 AHCTF1Q8WYP5 2266 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 OR2AG2A6NM03 316 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 TOX3O15405 576 aaPredicted RBP15.15■□□□□ 0.02
SNX6-205ENST00000555648 PJA2O43164 708 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 SLC28A2O43868 658 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 STK17BO94768 372 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 PRAMEF1O95521 474 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 CRTAMO95727 393 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 ANKRD34CP0C6C1 535 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 FAM87AP0C7U9 286 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 RBP3P10745 1247 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 RALBP11234 206 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 LIFP15018 202 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 ARSDP51689 593 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 GFERP55789 205 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 PDE1BQ01064 536 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 PLCL1Q15111 1095 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 TAF1AQ15573 450 aaPredicted RBP15.15■□□□□ 0.02
SNX6-205ENST00000555648 TBR1Q16650 682 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 LINC00303Q3SY05 128 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 ANKRD20A2Q5SQ80 823 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 GPRC6AQ5T6X5 926 aa15.15■□□□□ 0.02
SNX6-205ENST00000555648 ANKRD20A1Q5TYW2 823 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms