RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 DPY19L3Q6ZPD9 716 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 GALNT7Q86SF2 657 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 ITFG1Q8TB96 612 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 PEX13Q92968 403 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 ZFYVE19Q96K21 471 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 LRRC3BQ96PB8 259 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 RNF112Q9ULX5 631 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 TMEM247A6NEH6 219 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 MTHFD2P13995 350 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 PKMP14618 531 aaKnown RBP11.57□□□□□ -0.56
SHMT2-212ENST00000554467 FOXA1P55317 472 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 AP1S1P61966 158 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 ECT2LQ008S8 904 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 FOLH1Q04609 750 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 BTKQ06187 659 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 MMEL1Q495T6 779 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 ADGRD2Q7Z7M1 963 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 CPXM2Q8N436 756 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 TRPC4APQ8TEL6 797 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 ACDQ96AP0 544 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 LINGO1Q96FE5 620 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 SLC45A3Q96JT2 553 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 ASB8Q9H765 288 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 INTS10Q9NVR2 710 aaKnown RBP11.57□□□□□ -0.56
SHMT2-212ENST00000554467 CD84Q9UIB8 345 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 PIKFYVEQ9Y2I7 2098 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 ALPK3Q96L96 1907 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 A0A0J9YYE9 177 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 ECI2O75521 394 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 IGSF6O95976 241 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 TRBC1P01850 177 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 CPOXP36551 454 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 RPL5P46777 297 aaKnown RBP11.57□□□□□ -0.56
SHMT2-212ENST00000554467 C18orf21Q32NC0 220 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-212ENST00000554467 DNAL1Q4LDG9 190 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 TCEAL5Q5H9L2 206 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 ZNF678Q5SXM1 525 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 C9orf50Q5SZB4 431 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 FAM91A1Q658Y4 838 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 TMEM215Q68D42 235 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 SERPINA9Q86WD7 417 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 SNX32Q86XE0 403 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 OR2AP1Q8NGE2 309 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 LKAAEAR1Q8TD35 194 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 GDPD5Q8WTR4 605 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 ATP13A3Q9H7F0 1226 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 IL26Q9NPH9 171 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 TIMMDC1Q9NPL8 285 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 SEMA4BQ9NPR2 832 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-212ENST00000554467 TRMT6Q9UJA5 497 aaKnown RBP11.57□□□□□ -0.56
SHMT2-212ENST00000554467 LZTS1Q9Y250 596 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 ASB1Q9Y576 335 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 PRSS21Q9Y6M0 314 aa11.57□□□□□ -0.56
SHMT2-212ENST00000554467 KANSL1LA0AUZ9 987 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 H3BSA7 217 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 GAPDHSO14556 408 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-212ENST00000554467 NPHS1O60500 1241 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 COX4I1P13073 169 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 HMGCLP35914 325 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 VIPR2P41587 438 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 TTPAP49638 278 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 NME5P56597 212 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 DNAJB13P59910 316 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 SH3BP2P78314 561 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 MESP2Q0VG99 397 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 CCNIQ14094 377 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 C22orf39Q6P5X5 142 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 ADGRG6Q86SQ4 1221 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 IRF7Q92985 503 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 VOPP1Q96AW1 172 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 STN1Q9H668 368 aaKnown RBP11.56□□□□□ -0.56
SHMT2-212ENST00000554467 FBRSL1Q9HCM7 1045 aaKnown RBP11.56□□□□□ -0.56
SHMT2-212ENST00000554467 MAFFQ9ULX9 164 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 A0A1B0GTW7 788 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 CCDC160A6NGH7 325 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 SDHDO14521 159 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 TRIM16O95361 564 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 PORP16435 677 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-212ENST00000554467 BPIP17213 487 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 IMPDH1P20839 514 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 PIK3R1P27986 724 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 STT3AP46977 705 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 RAD51Q06609 339 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 TRIP10Q15642 601 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 Q6ZNX1 250 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 CD200R1Q8TD46 325 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 CNDP1Q96KN2 507 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 ATOH8Q96SQ7 321 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 LIN28AQ9H9Z2 209 aaKnown RBP11.56□□□□□ -0.56
SHMT2-212ENST00000554467 NDUFA13Q9P0J0 144 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 IRAK3Q9Y616 596 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 CLASP2O75122 1294 aaKnown RBP11.56□□□□□ -0.56
SHMT2-212ENST00000554467 E2F6O75461 281 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 CLPTM1O96005 669 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 ATP6V1B1P15313 513 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 EEF1DP29692 281 aaKnown RBP11.56□□□□□ -0.56
SHMT2-212ENST00000554467 CHRNA6Q15825 494 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 SCIMPQ6UWF3 145 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 CIPCQ9C0C6 399 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 MAGEE1Q9HCI5 957 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms