RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 FICDQ9BVA6 458 aa10.26□□□□□ -0.77
PTCD2P1-201ENST00000554393 UCK1Q9HA47 277 aa10.26□□□□□ -0.77
PTCD2P1-201ENST00000554393 ARNT2Q9HBZ2 717 aa10.26□□□□□ -0.77
PTCD2P1-201ENST00000554393 BPIFA1Q9NP55 256 aa10.26□□□□□ -0.77
PTCD2P1-201ENST00000554393 WASH6PQ9NQA3 447 aa10.26□□□□□ -0.77
PTCD2P1-201ENST00000554393 PDP2Q9P2J9 529 aa10.26□□□□□ -0.77
PTCD2P1-201ENST00000554393 TRIM10Q9UDY6 481 aa10.26□□□□□ -0.77
PTCD2P1-201ENST00000554393 PISDQ9UG56 409 aa10.26□□□□□ -0.77
PTCD2P1-201ENST00000554393 TMPRSS11EQ9UL52 423 aa10.26□□□□□ -0.77
PTCD2P1-201ENST00000554393 SDK2Q58EX2 2172 aa10.26□□□□□ -0.77
PTCD2P1-201ENST00000554393 KLHL33A6NCF5 533 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 C2orf81A6NN90 581 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 F5H423 210 aaPredicted RBP10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 GAPDHSO14556 408 aaPredicted RBP10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 STX7O15400 261 aaKnown RBP10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 KRT86O43790 486 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 FTCDO95954 541 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 AGTP01019 485 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 PTMAP06454 111 aaKnown RBP10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 HGFP14210 728 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 XRCC1P18887 633 aaPredicted RBP10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 LPOP22079 712 aaPredicted RBP10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 CD82P27701 267 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 CSF2RBP32927 897 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 UBE2IP63279 158 aaKnown RBP10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 DMPKQ09013 629 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 TMEM115Q12893 351 aaPredicted RBP10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 CLN3Q13286 438 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 GTF2H3Q13889 308 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 C16orf72Q14CZ0 275 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 KHDC1Q4VXA5 237 aaKnown RBP10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 ZNF648Q5T619 568 aaPredicted RBP10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 TMEM164Q5U3C3 297 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 AGAP9Q5VTM2 703 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 AADACL2Q6P093 401 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 CRTC3Q6UUV7 619 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 ABRAXAS1Q6UWZ7 409 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 FAM151BQ6UXP7 276 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 USP53Q70EK8 1073 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 C11orf96Q7Z7L8 435 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 ZNF547Q8IVP9 402 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 LSM14AQ8ND56 463 aaKnown RBP10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 AGBL5Q8NDL9 886 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 CCDC112Q8NEF3 446 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 SLC35B2Q8TB61 432 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 CCDC110Q8TBZ0 833 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 AHCYL2Q96HN2 611 aaKnown RBP10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 NAF1Q96HR8 494 aaKnown RBP10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 ZNF514Q96K75 400 aaPredicted RBP10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 CCDC74BQ96LY2 380 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 TTC25Q96NG3 672 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 FRMD8P1Q9BZ68 369 aaPredicted RBP10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 C10orf88Q9H8K7 445 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 ARFGAP3Q9NP61 516 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 KLC4Q9NSK0 619 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 CPNE7Q9UBL6 633 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 SLC23A2Q9UGH3 650 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 PCDHGA3Q9Y5H0 932 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 DNMT3AQ9Y6K1 912 aaPredicted RBP10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 CAPN6Q9Y6Q1 641 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 PIKFYVEQ9Y2I7 2098 aa10.25□□□□□ -0.77
PTCD2P1-201ENST00000554393 MGAQ8IWI9 3026 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 A0A0U1RQJ8 604 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 AGAP14A8MT82 685 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 ARHGAP6O43182 974 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 SNX2O60749 519 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 MTX2O75431 263 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 PRAMEF1O95521 474 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 CRTAMO95727 393 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 LIPCP11150 499 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 ITIH1P19827 911 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 IDSP22304 550 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 HADHAP40939 763 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 CFHR1Q03591 330 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 VAC14Q08AM6 782 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 MSLNQ13421 630 aaPredicted RBP10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 CHRNA6Q15825 494 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 PARP6Q2NL67 630 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 P3H1Q32P28 736 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 GPRC6AQ5T6X5 926 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 NKAIN2Q5VXU1 208 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 KCTD11Q693B1 232 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 DENND5AQ6IQ26 1287 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 ZNF662Q6ZS27 426 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 ARHGEF18Q6ZSZ5 1173 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 JAMLQ86YT9 394 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 TRAPPC5Q8IUR0 188 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 RBM12BQ8IXT5 1001 aaKnown RBP10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 GDAP1Q8TB36 358 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 RTP4Q96DX8 246 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 FAM118BQ9BPY3 351 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 OSGEPL1Q9H4B0 414 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 PRDM8Q9NQV8 689 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 POT1Q9NUX5 634 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 PACSIN2Q9UNF0 486 aaPredicted RBP10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 PCDHB3Q9Y5E6 796 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 ARL5AQ9Y689 179 aa10.24□□□□□ -0.77
PTCD2P1-201ENST00000554393 TRBV23OR9-2A0A075B6M9 112 aa10.23□□□□□ -0.77
PTCD2P1-201ENST00000554393 PRAMEF33A0A0G2JMD5 474 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms