RNA–Protein interactions for RNA: ENST00000550233.1

TMEM116-211, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM116, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-211ENST00000550233 MEP1AQ16819 746 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 HSP90AA5PQ58FG0 334 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 DCST1Q5T197 706 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 SUMO4Q6EEV6 95 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 RNF207Q6ZRF8 634 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 IRF2BP2Q7Z5L9 587 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 ZNF611Q8N823 705 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 CACTINQ8WUQ7 758 aaKnown RBP4.75□□□□□ -1.65
TMEM116-211ENST00000550233 DNAAF4Q8WXU2 420 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 EXTL1Q92935 676 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 CENPTQ96BT3 561 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 RITA1Q96K30 269 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 CACNG6Q9BXT2 260 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 KRT23Q9C075 422 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 NYXQ9GZU5 481 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 PPP1R3EQ9H7J1 279 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 MLXIPLQ9NP71 852 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 SPAG4Q9NPE6 437 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 TMEM161AQ9NX61 479 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 SLC17A6Q9P2U8 582 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 XPO7Q9UIA9 1087 aaKnown RBP4.75□□□□□ -1.65
TMEM116-211ENST00000550233 RCOR1Q9UKL0 485 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 UTS2RQ9UKP6 389 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 FBXW2Q9UKT8 454 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 TSC22D4Q9Y3Q8 395 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 GRIP1Q9Y3R0 1128 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 IKBKGQ9Y6K9 419 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 ADAMTS20P59510 1910 aa4.75□□□□□ -1.65
TMEM116-211ENST00000550233 ACEP12821 1306 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 GAGE12JA6NER3 117 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 PTGESO14684 152 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 WNT9BO14905 357 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 SLC16A5O15375 505 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 ZBTB43O43298 467 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 MED24O75448 989 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 CRCPO75575 148 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 PGLSO95336 258 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 RAB40ALP0C0E4 278 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 PLA2G4BP0C869 781 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 C8orf89P0DMQ9 161 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 ARF4P18085 180 aaPredicted RBP4.74□□□□□ -1.65
TMEM116-211ENST00000550233 ACAT1P24752 427 aaKnown RBP4.74□□□□□ -1.65
TMEM116-211ENST00000550233 NMBRP28336 390 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 HOXA11P31270 313 aaPredicted RBP4.74□□□□□ -1.65
TMEM116-211ENST00000550233 TIA1P31483 386 aaKnown RBP eCLIP4.74□□□□□ -1.654e-7■■■■□ 23.9
TMEM116-211ENST00000550233 WNT5AP41221 380 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 RARRES1P49788 294 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 CDH12P55289 794 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 HSD17B7P56937 341 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 POLR2FP61218 127 aaKnown RBP4.74□□□□□ -1.65
TMEM116-211ENST00000550233 CSNK2A1P68400 391 aaPredicted RBP4.74□□□□□ -1.65
TMEM116-211ENST00000550233 PPP2R2BQ00005 443 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 TUBA3CQ13748 450 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 KLHL26Q53HC5 615 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.74□□□□□ -1.65
TMEM116-211ENST00000550233 RNASEH2BQ5TBB1 312 aaKnown RBP4.74□□□□□ -1.65
TMEM116-211ENST00000550233 ERICH6BQ5W0A0 696 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 FRG2Q64ET8 278 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 HIST2H2BCQ6DN03 193 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 HIST2H2BDQ6DRA6 164 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 FAM109BQ6ICB4 259 aaPredicted RBP4.74□□□□□ -1.65
TMEM116-211ENST00000550233 OGFOD2Q6N063 350 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 TUBA3EQ6PEY2 450 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 ENPP7Q6UWV6 458 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 DLK2Q6UY11 383 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 Q6YL49 198 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 MB21D2Q8IYB1 491 aaPredicted RBP4.74□□□□□ -1.65
TMEM116-211ENST00000550233 ZNF595Q8IYB9 648 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 CNNM3Q8NE01 707 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 CSNK2A3Q8NEV1 391 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 OSR1Q8TAX0 266 aaPredicted RBP4.74□□□□□ -1.65
TMEM116-211ENST00000550233 SLC35F5Q8WV83 523 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 HEXDCQ8WVB3 486 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 RAD54LQ92698 747 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 BCL2L2Q92843 193 aaPredicted RBP4.74□□□□□ -1.65
TMEM116-211ENST00000550233 SNRNP40Q96DI7 357 aaKnown RBP4.74□□□□□ -1.65
TMEM116-211ENST00000550233 NLRP4Q96MN2 994 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 MUS81Q96NY9 551 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 PRAM1Q96QH2 718 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 WDR83Q9BRX9 315 aaKnown RBP4.74□□□□□ -1.65
TMEM116-211ENST00000550233 KATNB1Q9BVA0 655 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 NPFFR1Q9GZQ6 430 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 LHPPQ9H008 270 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 ZCCHC4Q9H5U6 513 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 ESRP2Q9H6T0 727 aaKnown RBP4.74□□□□□ -1.65
TMEM116-211ENST00000550233 PRMT8Q9NR22 394 aaPredicted RBP4.74□□□□□ -1.65
TMEM116-211ENST00000550233 POLE3Q9NRF9 147 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 SPG21Q9NZD8 308 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 TBC1D7Q9P0N9 293 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 CPSF3Q9UKF6 684 aaKnown RBP4.74□□□□□ -1.65
TMEM116-211ENST00000550233 AGO2Q9UKV8 859 aaKnown RBP4.74□□□□□ -1.65
TMEM116-211ENST00000550233 ITM2BQ9Y287 266 aa4.74□□□□□ -1.65
TMEM116-211ENST00000550233 FNDC1Q4ZHG4 1894 aaPredicted RBP4.74□□□□□ -1.65
TMEM116-211ENST00000550233 HS3ST1O14792 307 aa4.73□□□□□ -1.65
TMEM116-211ENST00000550233 PLSCR1O15162 318 aa4.73□□□□□ -1.65
TMEM116-211ENST00000550233 UGDHO60701 494 aa4.73□□□□□ -1.65
TMEM116-211ENST00000550233 RAD51DO75771 328 aa4.73□□□□□ -1.65
TMEM116-211ENST00000550233 LUC7L3O95232 432 aaKnown RBP4.73□□□□□ -1.65
TMEM116-211ENST00000550233 CLDN7O95471 211 aa4.73□□□□□ -1.65
TMEM116-211ENST00000550233 SLC16A8O95907 504 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms