RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 KCNK6Q9Y257 313 aa16.56■□□□□ 0.24
CCDC38-203ENST00000546803 RPS6KL1Q9Y6S9 549 aa16.56■□□□□ 0.24
CCDC38-203ENST00000546803 TMEM131Q92545 1883 aa16.56■□□□□ 0.24
CCDC38-203ENST00000546803 OR2AG2A6NM03 316 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 F8W8V4 182 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 CD3EAPO15446 510 aaKnown RBP16.55■□□□□ 0.24
CCDC38-203ENST00000546803 RFPL3O75679 317 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 USP1O94782 785 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 VAPBO95292 243 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 TTC4O95801 387 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 SLC2A4P14672 509 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 TTPAP49638 278 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 PRLHRP49683 370 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 DRG2P55039 364 aaKnown RBP16.55■□□□□ 0.24
CCDC38-203ENST00000546803 ARL4CP56559 192 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 E2F1Q01094 437 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 DHX9Q08211 1270 aaKnown RBP16.55■□□□□ 0.24
CCDC38-203ENST00000546803 HIF1AQ16665 826 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 MRNIPQ6NTE8 343 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 C8orf74Q6P047 294 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 CES3Q6UWW8 571 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 DET1Q7L5Y6 550 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 C17orf82Q86X59 251 aaPredicted RBP16.55■□□□□ 0.24
CCDC38-203ENST00000546803 CCNJLQ8IV13 435 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 MMGT1Q8N4V1 131 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 CEP112Q8N8E3 955 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 ADAMTS14Q8WXS8 1223 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 ZNF669Q96BR6 464 aaPredicted RBP16.55■□□□□ 0.24
CCDC38-203ENST00000546803 EBNA1BP2Q99848 306 aaKnown RBP16.55■□□□□ 0.24
CCDC38-203ENST00000546803 VPS37BQ9H9H4 285 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 TBC1D29Q9UFV1 150 aa16.55■□□□□ 0.24
CCDC38-203ENST00000546803 COL5A1P20908 1838 aaPredicted RBP16.54■□□□□ 0.24
CCDC38-203ENST00000546803 CPED1A4D0V7 1026 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 MGAT4DA6NG13 374 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 PRR19A6NJB7 356 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 OR5K4A6NMS3 321 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 TP73O15350 636 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 SGTAO43765 313 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 POLBP06746 335 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 GSTM1P09488 218 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 MYF5P13349 255 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 GLB1P16278 677 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 PGAM1P18669 254 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 IDSP22304 550 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 ARNTP27540 789 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 ARCN1P48444 511 aaKnown RBP16.54■□□□□ 0.24
CCDC38-203ENST00000546803 GSTM4Q03013 218 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 CAV1Q03135 178 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 CBLBQ13191 982 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 HLTFQ14527 1009 aaKnown RBP eCLIP16.54■□□□□ 0.24
CCDC38-203ENST00000546803 PLA2G4EQ3MJ16 856 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 BBS9Q3SYG4 887 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 GUSBP11Q6P575 273 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 WASH2PQ6VEQ5 465 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 MICALCLQ6ZW33 695 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 EFL1Q7Z2Z2 1120 aaKnown RBP16.54■□□□□ 0.24
CCDC38-203ENST00000546803 SDCCAG8Q86SQ7 713 aaPredicted RBP16.54■□□□□ 0.24
CCDC38-203ENST00000546803 NAGSQ8N159 534 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 AGGF1Q8N302 714 aaeCLIP16.54■□□□□ 0.24
CCDC38-203ENST00000546803 GPR150Q8NGU9 434 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 OR2L2Q8NH16 312 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 IFI44Q8TCB0 444 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 FCRL3Q96P31 734 aaPredicted RBP16.54■□□□□ 0.24
CCDC38-203ENST00000546803 DPH5Q9H2P9 285 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 OSGEPL1Q9H4B0 414 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 WASH6PQ9NQA3 447 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 DNAJC16Q9Y2G8 782 aa16.54■□□□□ 0.24
CCDC38-203ENST00000546803 KIR2DS5A0A0G2JLQ3 304 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 A0A0G2JNG1 304 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 ZCWPW2A0A1B0GU75 182 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 C17orf113A0A1B0GUU1 675 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 A6NCN8 305 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 KIR2DS3K7RE56 304 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 PFDN6O15212 129 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 NUDT21O43809 227 aaKnown RBP16.53■□□□□ 0.24
CCDC38-203ENST00000546803 SNX2O60749 519 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 F3P13726 295 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 PNLIPP16233 465 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 PMLP29590 882 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 KIR2DS5Q14953 304 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 MSS51Q4VC12 460 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 AGAP9Q5VTM2 703 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 NEPROQ6NW34 567 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 IYDQ6PHW0 289 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 ARL14Q8N4G2 192 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 AVL9Q8NBF6 648 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 TCF12Q99081 682 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 MARCH4Q9P2E8 410 aaPredicted RBP16.53■□□□□ 0.24
CCDC38-203ENST00000546803 FAM169AQ9Y6X4 670 aa16.53■□□□□ 0.24
CCDC38-203ENST00000546803 SCN8AQ9UQD0 1980 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 PDZK1P1A8MUH7 402 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 ADRB1P08588 477 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 OR56A5P0C7T3 313 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 OGNP20774 298 aaKnown RBP16.52■□□□□ 0.24
CCDC38-203ENST00000546803 BIRC2Q13490 618 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 THOC5Q13769 683 aaKnown RBP16.52■□□□□ 0.24
CCDC38-203ENST00000546803 SEMA3AQ14563 771 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 LONRF1Q17RB8 773 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 GLE1Q53GS7 698 aaKnown RBP16.52■□□□□ 0.24
CCDC38-203ENST00000546803 CCDC157Q569K6 752 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms