RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 IGF2-ASQ6U949 168 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 WASH2PQ6VEQ5 465 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 RAB11FIP2Q7L804 512 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 C11orf96Q7Z7L8 435 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 PRUNE1Q86TP1 453 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 TRIM48Q8IWZ4 208 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 NXPE1Q8N323 547 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 FBXO39Q8N4B4 442 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 SLC46A1Q96NT5 459 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 DCBLD2Q96PD2 775 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 COPS8Q99627 209 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 CMKLR1Q99788 373 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 WASH6PQ9NQA3 447 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 ASXL3Q9C0F0 2248 aa15.47■□□□□ 0.07
CCDC78-216ENST00000544996 HEATR9A2RTY3 570 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 KLHL33A6NCF5 533 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 MROH6A6NGR9 719 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 H7C0S8 307 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 AP3B1O00203 1094 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 CCL22O00626 93 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 DUX1O43812 170 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 TNFSF15O95150 251 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 VIPP01282 170 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 JMJD7P0C870 316 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 ZSCAN5DPP0CG00 497 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 RPL10P27635 214 aaKnown RBP15.46■□□□□ 0.07
CCDC78-216ENST00000544996 CA5AP35218 305 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 KCNJ1P48048 391 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 BASP1P80723 227 aaKnown RBP15.46■□□□□ 0.07
CCDC78-216ENST00000544996 DMPKQ09013 629 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 ZRANB3Q5FWF4 1079 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 NKAIN2Q5VXU1 208 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 ABRAXAS1Q6UWZ7 409 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 LRRC69Q6ZNQ3 347 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 DET1Q7L5Y6 550 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 TAS2R42Q7RTR8 314 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 ZNF761Q86XN6 746 aaPredicted RBP15.46■□□□□ 0.07
CCDC78-216ENST00000544996 SLC35F6Q8N357 371 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 RASGEF1CQ8N431 466 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 PRELID2Q8N945 189 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 GLIS1Q8NBF1 620 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 SNIP1Q8TAD8 396 aaKnown RBP15.46■□□□□ 0.07
CCDC78-216ENST00000544996 SGF29Q96ES7 293 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 CDKN2AIPNLQ96HQ2 116 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 PDLIM2Q96JY6 352 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 NUDT22Q9BRQ3 303 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 FAM96AQ9H5X1 160 aa15.46■□□□□ 0.07
CCDC78-216ENST00000544996 TTC7AQ9ULT0 858 aaPredicted RBP15.46■□□□□ 0.07
CCDC78-216ENST00000544996 PRR19A6NJB7 356 aa15.45■□□□□ 0.06
CCDC78-216ENST00000544996 ITGA2BP08514 1039 aa15.45■□□□□ 0.06
CCDC78-216ENST00000544996 ADRA1DP25100 572 aa15.45■□□□□ 0.06
CCDC78-216ENST00000544996 PBLDP30039 288 aaPredicted RBP15.45■□□□□ 0.06
CCDC78-216ENST00000544996 EPHA4P54764 986 aa15.45■□□□□ 0.06
CCDC78-216ENST00000544996 DRG2P55039 364 aaKnown RBP15.45■□□□□ 0.06
CCDC78-216ENST00000544996 PCBP4P57723 403 aaKnown RBP15.45■□□□□ 0.06
CCDC78-216ENST00000544996 CACNG1Q06432 222 aa15.45■□□□□ 0.06
CCDC78-216ENST00000544996 CCDC38Q502W7 563 aa15.45■□□□□ 0.06
CCDC78-216ENST00000544996 NLRP9Q7RTR0 991 aa15.45■□□□□ 0.06
CCDC78-216ENST00000544996 TMPRSS9Q7Z410 1059 aa15.45■□□□□ 0.06
CCDC78-216ENST00000544996 SLITRK4Q8IW52 837 aa15.45■□□□□ 0.06
CCDC78-216ENST00000544996 OR4D9Q8NGE8 314 aa15.45■□□□□ 0.06
CCDC78-216ENST00000544996 MAGOHBQ96A72 148 aaKnown RBP15.45■□□□□ 0.06
CCDC78-216ENST00000544996 CXorf40BQ96DE9 158 aa15.45■□□□□ 0.06
CCDC78-216ENST00000544996 MS4A14Q96JA4 679 aa15.45■□□□□ 0.06
CCDC78-216ENST00000544996 RANBP9Q96S59 729 aa15.45■□□□□ 0.06
CCDC78-216ENST00000544996 SEMA6CQ9H3T2 930 aa15.45■□□□□ 0.06
CCDC78-216ENST00000544996 EPB41L1Q9H4G0 881 aa15.45■□□□□ 0.06
CCDC78-216ENST00000544996 UCK1Q9HA47 277 aa15.45■□□□□ 0.06
CCDC78-216ENST00000544996 CASS4Q9NQ75 786 aa15.45■□□□□ 0.06
CCDC78-216ENST00000544996 EIF2B3Q9NR50 452 aaKnown RBP15.45■□□□□ 0.06
CCDC78-216ENST00000544996 ZDHHC3Q9NYG2 299 aa15.45■□□□□ 0.06
CCDC78-216ENST00000544996 LOXL2Q9Y4K0 774 aa15.45■□□□□ 0.06
CCDC78-216ENST00000544996 SCN8AQ9UQD0 1980 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 RP1P56715 2156 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 A0A087WV48 116 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 IGHV5-10-1A0A0J9YXX1 117 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 A0A1W2PNU3 283 aaPredicted RBP15.44■□□□□ 0.06
CCDC78-216ENST00000544996 MGAT4DA6NG13 374 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 PGRMC1O00264 195 aaKnown RBP15.44■□□□□ 0.06
CCDC78-216ENST00000544996 TLX3O43711 291 aaPredicted RBP15.44■□□□□ 0.06
CCDC78-216ENST00000544996 KRT37O76014 449 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 ATP1B2P14415 290 aaPredicted RBP15.44■□□□□ 0.06
CCDC78-216ENST00000544996 EIF2S3P41091 472 aaKnown RBP15.44■□□□□ 0.06
CCDC78-216ENST00000544996 GRIA1P42261 906 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 MAPK9P45984 424 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 LIMK2P53671 638 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 UBE2IP63279 158 aaKnown RBP15.44■□□□□ 0.06
CCDC78-216ENST00000544996 TRA2AQ13595 282 aaKnown RBP eCLIP15.44■□□□□ 0.06
CCDC78-216ENST00000544996 BCL7AQ4VC05 210 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 TMEM71Q6P5X7 295 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 WDR74Q6RFH5 385 aaPredicted RBP15.44■□□□□ 0.06
CCDC78-216ENST00000544996 SERPINA9Q86WD7 417 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 RBM12BQ8IXT5 1001 aaKnown RBP15.44■□□□□ 0.06
CCDC78-216ENST00000544996 BEND7Q8N7W2 519 aaPredicted RBP15.44■□□□□ 0.06
CCDC78-216ENST00000544996 ZNF248Q8NDW4 579 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.44■□□□□ 0.06
CCDC78-216ENST00000544996 OSBPL9Q96SU4 736 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 TTC1Q99614 292 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 AP1M1Q9BXS5 423 aa15.44■□□□□ 0.06
CCDC78-216ENST00000544996 VPS37BQ9H9H4 285 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms