RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 JAMLQ86YT9 394 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 TMEM139Q8IV31 216 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 SFRP1Q8N474 314 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 FAM71DQ8N9W8 422 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 GPR26Q8NDV2 337 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 PHC3Q8NDX5 983 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 DDHD1Q8NEL9 900 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 ZNF398Q8TD17 642 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 GRK7Q8WTQ7 553 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 STYXQ8WUJ0 223 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 ALG3Q92685 438 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 PEX13Q92968 403 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 VOPP1Q96AW1 172 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 ATXN7L3BQ96GX2 97 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 RUNDC3BQ96NL0 473 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 COPS8Q99627 209 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 DESI2Q9BSY9 194 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 TMEM121Q9BTD3 319 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 FICDQ9BVA6 458 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 TRIT1Q9H3H1 467 aaKnown RBP5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 GOLPH3Q9H4A6 298 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 ASB8Q9H765 288 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 IL26Q9NPH9 171 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 SPATS2LQ9NUQ6 558 aaKnown RBP5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 SMOXQ9NWM0 555 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 BFARQ9NZS9 450 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 IL17CQ9P0M4 197 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 SATB2Q9UPW6 733 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 DRG1Q9Y295 367 aaKnown RBP5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 VPS9D1Q9Y2B5 631 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 PCDHGA7Q9Y5G6 932 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 RNF215Q9Y6U7 377 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 U3KQA8 63 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 RELNP78509 3460 aa5.53□□□□□ -1.52
CLSTN3-215ENST00000544584 UNC13CQ8NB66 2214 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 ANKRD36A6QL64 1941 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 TEX51A0A1B0GUA7 166 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 RCCD1A6NED2 376 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 MGAT4DA6NG13 374 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 LILRA5A6NI73 299 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 STMND1H3BQB6 276 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 KPNA5O15131 536 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 CEP104O60308 925 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 SRP72O76094 671 aaKnown RBP5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 TNFSF15O95150 251 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 SOD1P00441 154 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 AGTP01019 485 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 FTH1P02794 183 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 MPOP05164 745 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 SLC35G4P0C7Q5 338 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 OR56A5P0C7T3 313 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 PIRTP0C851 137 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 SFTPCP11686 197 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 ATP1B2P14415 290 aaPredicted RBP5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 ZNF8P17098 575 aaPredicted RBP5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 GM2AP17900 193 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 PAMP19021 973 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 ADRA1DP25100 572 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 AK4P27144 223 aaPredicted RBP5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 UGT1A5P35504 534 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 EIF2S3P41091 472 aaKnown RBP5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 NSG1P42857 185 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 CCR10P46092 362 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 MARCKSL1P49006 195 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 LIMK2P53671 638 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 OR1D5P58170 312 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 PRAMEP78395 509 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 MC1RQ01726 317 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 RHDQ02161 417 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 CACNG1Q06432 222 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 ZFP36L1Q07352 338 aaKnown RBP5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 RPA4Q13156 261 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 SEPT6Q14141 434 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 PLCL1Q15111 1095 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 ATP13A5Q4VNC0 1218 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 ZRANB3Q5FWF4 1079 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 PERM1Q5SV97 790 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 TMTC4Q5T4D3 741 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 DCAF12Q5T6F0 453 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 AGAP9Q5VTM2 703 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 TTC23LQ6PF05 361 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 TMEM220Q6QAJ8 160 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 CRTC3Q6UUV7 619 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 KDELC1Q6UW63 502 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 CEACAM20Q6UY09 585 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 ADGRG6Q86SQ4 1221 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 SDCCAG8Q86SQ7 713 aaPredicted RBP5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 C17orf82Q86X59 251 aaPredicted RBP5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 SLC13A5Q86YT5 568 aaPredicted RBP5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 CARFQ8N187 725 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 RAB42Q8N4Z0 105 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 PPHLN1Q8NEY8 458 aaKnown RBP5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 OR4K2Q8NGD2 314 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 CCDC110Q8TBZ0 833 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 LRRN4Q8WUT4 740 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 NCSTNQ92542 709 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 KIAA1143Q96AT1 154 aaPredicted RBP5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 RTP4Q96DX8 246 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 TAAR9Q96RI9 348 aa5.52□□□□□ -1.53
CLSTN3-215ENST00000544584 IL22Q9GZX6 179 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms