RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 B4GALNT4Q76KP1 1039 aa12.91□□□□□ -0.34
RTN3-212ENST00000543123 PID1Q7Z2X4 250 aa12.91□□□□□ -0.34
RTN3-212ENST00000543123 ZC3H18Q86VM9 953 aaKnown RBP12.91□□□□□ -0.34
RTN3-212ENST00000543123 ESX1Q8N693 406 aa12.91□□□□□ -0.34
RTN3-212ENST00000543123 LRRC45Q96CN5 670 aa12.91□□□□□ -0.34
RTN3-212ENST00000543123 ZDHHC12Q96GR4 267 aa12.91□□□□□ -0.34
RTN3-212ENST00000543123 SLC45A3Q96JT2 553 aa12.91□□□□□ -0.34
RTN3-212ENST00000543123 ZNF514Q96K75 400 aaPredicted RBP12.91□□□□□ -0.34
RTN3-212ENST00000543123 C9orf72Q96LT7 481 aa12.91□□□□□ -0.34
RTN3-212ENST00000543123 FCRL5Q96RD9 977 aa12.91□□□□□ -0.34
RTN3-212ENST00000543123 SLC12A9Q9BXP2 914 aa12.91□□□□□ -0.34
RTN3-212ENST00000543123 TRIM5Q9C035 493 aa12.91□□□□□ -0.34
RTN3-212ENST00000543123 BPIFA1Q9NP55 256 aa12.91□□□□□ -0.34
RTN3-212ENST00000543123 GEMIN8Q9NWZ8 242 aaKnown RBP12.91□□□□□ -0.34
RTN3-212ENST00000543123 RSPH14Q9UHP6 348 aa12.91□□□□□ -0.34
RTN3-212ENST00000543123 TMEM184BQ9Y519 407 aaPredicted RBP12.91□□□□□ -0.34
RTN3-212ENST00000543123 GLYATL1P3A0A0U1RQE8 302 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 KLHL33A6NCF5 533 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 APOC4-APOC2K7ER74 178 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 AURKAO14965 403 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 MTX2O75431 263 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 RASSF9O75901 435 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 ANXA9O76027 345 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 LCA5LO95447 670 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 APOC2P02655 101 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 C9P02748 559 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 TYRP1P17643 537 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 RPL10P27635 214 aaKnown RBP12.9□□□□□ -0.34
RTN3-212ENST00000543123 CD68P34810 354 aaPredicted RBP12.9□□□□□ -0.34
RTN3-212ENST00000543123 SLC19A1P41440 591 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 COPS2P61201 443 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 CYP4F2P78329 520 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 XRCC4Q13426 336 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 IL11RAQ14626 422 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 SLC1A5Q15758 541 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 BBS12Q6ZW61 710 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 DAAM2Q86T65 1068 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 AMZ2Q86W34 360 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 ZNF547Q8IVP9 402 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 ZNF567Q8N184 647 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 SLC25A41Q8N5S1 370 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 DDHD1Q8NEL9 900 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 IPMKQ8NFU5 416 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 BLOC1S5Q8TDH9 187 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 TGM7Q96PF1 710 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 PPP1R2P1Q96PQ5 205 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 CTRCQ99895 268 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 ZNF768Q9H5H4 540 aaKnown RBP12.9□□□□□ -0.34
RTN3-212ENST00000543123 IL26Q9NPH9 171 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 IL17CQ9P0M4 197 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 ZNF624Q9P2J8 865 aaPredicted RBP12.9□□□□□ -0.34
RTN3-212ENST00000543123 SLC23A2Q9UGH3 650 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 TUBD1Q9UJT1 453 aa12.9□□□□□ -0.34
RTN3-212ENST00000543123 PRR19A6NJB7 356 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 STX7O15400 261 aaKnown RBP12.89□□□□□ -0.35
RTN3-212ENST00000543123 CTNNA2P26232 953 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 AKT1P31749 480 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 CETN2P41208 172 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 CCR10P46092 362 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 GEMP55040 296 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 KCNC4Q03721 635 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 FOXM1Q08050 763 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 DMPKQ09013 629 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 LONRF2Q1L5Z9 754 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 FAM151BQ6UXP7 276 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 ATG14Q6ZNE5 492 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 PRSS42Q7Z5A4 293 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 TTC30BQ8N4P2 665 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 TC2NQ8N9U0 490 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 HAUS1Q96CS2 278 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 OXNAD1Q96HP4 312 aaPredicted RBP12.89□□□□□ -0.35
RTN3-212ENST00000543123 MRGPRX2Q96LB1 330 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 ULBP3Q9BZM4 244 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 SLC25A18Q9H1K4 315 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 GBA3Q9H227 469 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 CLMPQ9H6B4 373 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 SLC40A1Q9NP59 571 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 SMOXQ9NWM0 555 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 SIDT1Q9NXL6 827 aaKnown RBP12.89□□□□□ -0.35
RTN3-212ENST00000543123 SCHIP1Q9P0W5 487 aaPredicted RBP12.89□□□□□ -0.35
RTN3-212ENST00000543123 EPHA6Q9UF33 1036 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 PCDHA13Q9Y5I0 950 aa12.89□□□□□ -0.35
RTN3-212ENST00000543123 DNMT3AQ9Y6K1 912 aaPredicted RBP12.89□□□□□ -0.35
RTN3-212ENST00000543123 MACROD2A1Z1Q3 448 aa12.88□□□□□ -0.35
RTN3-212ENST00000543123 OR52A4PA6NMU1 304 aa12.88□□□□□ -0.35
RTN3-212ENST00000543123 C2orf81A6NN90 581 aa12.88□□□□□ -0.35
RTN3-212ENST00000543123 H7C0C1 242 aa12.88□□□□□ -0.35
RTN3-212ENST00000543123 PYGMP11217 842 aa12.88□□□□□ -0.35
RTN3-212ENST00000543123 BRAFP15056 766 aa12.88□□□□□ -0.35
RTN3-212ENST00000543123 STAT5AP42229 794 aa12.88□□□□□ -0.35
RTN3-212ENST00000543123 CHRNA4P43681 627 aa12.88□□□□□ -0.35
RTN3-212ENST00000543123 ATP5OP48047 213 aa12.88□□□□□ -0.35
RTN3-212ENST00000543123 DRG2P55039 364 aaKnown RBP12.88□□□□□ -0.35
RTN3-212ENST00000543123 GFERP55789 205 aa12.88□□□□□ -0.35
RTN3-212ENST00000543123 POLE2P56282 527 aa12.88□□□□□ -0.35
RTN3-212ENST00000543123 PDE1BQ01064 536 aa12.88□□□□□ -0.35
RTN3-212ENST00000543123 KCNAB2Q13303 367 aa12.88□□□□□ -0.35
RTN3-212ENST00000543123 GPR18Q14330 331 aa12.88□□□□□ -0.35
RTN3-212ENST00000543123 PRPSAP1Q14558 356 aa12.88□□□□□ -0.35
RTN3-212ENST00000543123 LLGL1Q15334 1064 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms